» Articles » PMID: 37733182

Construction of a Novel Disulfidptosis-Related LncRNA Prognostic Signature in Pancreatic Cancer

Overview
Journal Mol Biotechnol
Publisher Springer
Date 2023 Sep 21
PMID 37733182
Authors
Affiliations
Soon will be listed here.
Abstract

Pancreatic cancer is a lethal, extremely aggressive gastrointestinal tumor with a poor prognosis and limited treatment alternatives. Disulfidptosis is a newly defined type of cell death with potential influence on cancer. Research on the association between disulfidptosis and pancreatic cancer is scarce. The expression data of disulfidptosis-related genes were downloaded from The Cancer Genome Atlas-Pancreatic Adenocarcinoma (TCGA). Disulfidptosis-related lncRNA signature (DRLS) was developed through the Cox and the least absolute shrinkage and selection operator (LASSO) analysis. Differences in enrichment functions, mutational landscape, immune microenvironment, and predicted therapeutic efficacy between high- and low-risk groups were assessed. Consensus clustering analysis was applied to identify the DRLS-related subtypes. Among 98 disulfidptosis-related lncRNAs, 5 lncRNAs were screened thus constructing a prognostic DRLS. DRLS showed high predictive accuracy and was an independent prognostic factor for pancreatic cancer. According to the risk scores calculated from the signature, samples were categorized into high- and low- risk groups. Overall, low-risk patients had a better prognosis, lower mutational occurrences, higher immune cell infiltration and more sensitivity to anti-tumor agents. The DRLS performed well in predicting prognosis and revealed intimate correlation with biological function, mutation status and immune infiltration landscape of pancreatic cancer, providing some insights for future research on the relationship between disulfidptosis and pancreatic cancer.

Citing Articles

Comprehensive identification of a disulfidptosis-associated long non-coding RNA signature to predict the prognosis and treatment options in ovarian cancer.

Liu S, Jiang R, Wang X, Zhang Q, Li S, Sun X Front Endocrinol (Lausanne). 2024; 15:1434705.

PMID: 39345881 PMC: 11427372. DOI: 10.3389/fendo.2024.1434705.


Disulfidptosis-related lncRNA signature reveals immune microenvironment and novel molecular subtyping of stomach adenocarcinoma.

Li J, Xia C, Song Y, Zhang L, Shang W, Xu N Heliyon. 2024; 10(8):e29005.

PMID: 38628708 PMC: 11019176. DOI: 10.1016/j.heliyon.2024.e29005.


Development of a novel disulfidptosis-related lncRNA signature for prognostic and immune response prediction in clear cell renal cell carcinoma.

Wang N, Hu Y, Wang S, Xu Q, Jiao X, Wang Y Sci Rep. 2024; 14(1):624.

PMID: 38182642 PMC: 10770353. DOI: 10.1038/s41598-024-51197-2.

References
1.
Diaz-Cano S . Tumor heterogeneity: mechanisms and bases for a reliable application of molecular marker design. Int J Mol Sci. 2012; 13(2):1951-2011. PMC: 3292002. DOI: 10.3390/ijms13021951. View

2.
Wang D, Liu B, Zhang Z . Accelerating the understanding of cancer biology through the lens of genomics. Cell. 2023; 186(8):1755-1771. DOI: 10.1016/j.cell.2023.02.015. View

3.
Vitale I, Shema E, Loi S, Galluzzi L . Intratumoral heterogeneity in cancer progression and response to immunotherapy. Nat Med. 2021; 27(2):212-224. DOI: 10.1038/s41591-021-01233-9. View

4.
Muller S, Raulefs S, Bruns P, Afonso-Grunz F, Plotner A, Thermann R . Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer. Mol Cancer. 2015; 14:94. PMC: 4417536. DOI: 10.1186/s12943-015-0358-5. View

5.
Kisling S, Atri P, Shah A, Cox J, Sharma S, Smith L . A Novel HOXA10-Associated 5-Gene-Based Prognostic Signature for Stratification of Short-term Survivors of Pancreatic Ductal Adenocarcinoma. Clin Cancer Res. 2023; 29(18):3759-3770. PMC: 10529249. DOI: 10.1158/1078-0432.CCR-23-0825. View