» Articles » PMID: 37340076

Poly (A)-specific Ribonuclease Deficiency Impacts Oogenesis in Zebrafish

Overview
Journal Sci Rep
Specialty Science
Date 2023 Jun 20
PMID 37340076
Authors
Affiliations
Soon will be listed here.
Abstract

Poly (A)-specific ribonuclease (PARN) is the most important 3'-5'exonuclease involved in the process of deadenylation, the removal of poly (A) tails of mRNAs. Although PARN is primarily known for its role in mRNA stability, recent studies suggest several other functions of PARN including a role in telomere biology, non-coding RNA maturation, trimming of miRNAs, ribosome biogenesis and TP53 function. Moreover, PARN expression is de-regulated in many cancers, including solid tumours and hematopoietic malignancies. To better understand the in vivo role of PARN, we used a zebrafish model to study the physiological consequences of Parn loss-of-function. Exon 19 of the gene, which partially codes for the RNA binding domain of the protein, was targeted for CRISPR-Cas9-directed genome editing. Contrary to the expectations, no developmental defects were observed in the zebrafish with a parn nonsense mutation. Intriguingly, the parn null mutants were viable and fertile, but turned out to only develop into males. Histological analysis of the gonads in the mutants and their wild type siblings revealed a defective maturation of gonadal cells in the parn null mutants. The results of this study highlight yet another emerging function of Parn, i.e., its role in oogenesis.

Citing Articles

In Search of a Target Gene for a Desirable Phenotype in Aquaculture: Genome Editing of Cyprinidae and Salmonidae Species.

Orlova S, Ruzina M, Emelianova O, Sergeev A, Chikurova E, Orlov A Genes (Basel). 2024; 15(6).

PMID: 38927661 PMC: 11202958. DOI: 10.3390/genes15060726.


The molecular mechanisms underpinning maternal mRNA dormancy.

Lorenzo-Orts L, Pauli A Biochem Soc Trans. 2024; 52(2):861-871.

PMID: 38477334 PMC: 11088918. DOI: 10.1042/BST20231122.


Assessing the impact of meta-genomic tools on current cutting-edge genome engineering and technology.

Dweh T, Pattnaik S, Sahoo J Int J Biochem Mol Biol. 2023; 14(4):62-75.

PMID: 37736390 PMC: 10509535.

References
1.
Copeland P, Wormington M . The mechanism and regulation of deadenylation: identification and characterization of Xenopus PARN. RNA. 2001; 7(6):875-86. PMC: 1370141. DOI: 10.1017/s1355838201010020. View

2.
Rouf M, Wen L, Mahendra Y, Wang J, Zhang K, Liang S . The recent advances and future perspectives of genetic compensation studies in the zebrafish model. Genes Dis. 2023; 10(2):468-479. PMC: 10201552. DOI: 10.1016/j.gendis.2021.12.003. View

3.
He G, Zhang A, Liu W, Yan Y . Distinct roles of the R3H and RRM domains in poly(A)-specific ribonuclease structural integrity and catalysis. Biochim Biophys Acta. 2013; 1834(6):1089-98. DOI: 10.1016/j.bbapap.2013.01.038. View

4.
Berndt H, Harnisch C, Rammelt C, Stohr N, Zirkel A, Dohm J . Maturation of mammalian H/ACA box snoRNAs: PAPD5-dependent adenylation and PARN-dependent trimming. RNA. 2012; 18(5):958-72. PMC: 3334704. DOI: 10.1261/rna.032292.112. View

5.
Benyelles M, Episkopou H, ODonohue M, Kermasson L, Frange P, Poulain F . Impaired telomere integrity and rRNA biogenesis in PARN-deficient patients and knock-out models. EMBO Mol Med. 2019; 11(7):e10201. PMC: 6609912. DOI: 10.15252/emmm.201810201. View