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Evidence-driven Spatiotemporal COVID-19 Hospitalization Prediction with Ising Dynamics

Overview
Journal Nat Commun
Specialty Biology
Date 2023 May 29
PMID 37248229
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Abstract

In this work, we aim to accurately predict the number of hospitalizations during the COVID-19 pandemic by developing a spatiotemporal prediction model. We propose HOIST, an Ising dynamics-based deep learning model for spatiotemporal COVID-19 hospitalization prediction. By drawing the analogy between locations and lattice sites in statistical mechanics, we use the Ising dynamics to guide the model to extract and utilize spatial relationships across locations and model the complex influence of granular information from real-world clinical evidence. By leveraging rich linked databases, including insurance claims, census information, and hospital resource usage data across the U.S., we evaluate the HOIST model on the large-scale spatiotemporal COVID-19 hospitalization prediction task for 2299 counties in the U.S. In the 4-week hospitalization prediction task, HOIST achieves 368.7 mean absolute error, 0.6 [Formula: see text] and 0.89 concordance correlation coefficient score on average. Our detailed number needed to treat (NNT) and cost analysis suggest that future COVID-19 vaccination efforts may be most impactful in rural areas. This model may serve as a resource for future county and state-level vaccination efforts.

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References
1.
Bennett T, Moffitt R, Hajagos J, Amor B, Anand A, Bissell M . Clinical Characterization and Prediction of Clinical Severity of SARS-CoV-2 Infection Among US Adults Using Data From the US National COVID Cohort Collaborative. JAMA Netw Open. 2021; 4(7):e2116901. PMC: 8278272. DOI: 10.1001/jamanetworkopen.2021.16901. View

2.
Yang Z, Zeng Z, Wang K, Wong S, Liang W, Zanin M . Modified SEIR and AI prediction of the epidemics trend of COVID-19 in China under public health interventions. J Thorac Dis. 2020; 12(3):165-174. PMC: 7139011. DOI: 10.21037/jtd.2020.02.64. View

3.
Coletti P, Libin P, Petrof O, Willem L, Abrams S, Herzog S . A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies. BMC Infect Dis. 2021; 21(1):503. PMC: 8164894. DOI: 10.1186/s12879-021-06092-w. View

4.
Callaway E . Fast-spreading COVID variant can elude immune responses. Nature. 2021; 589(7843):500-501. DOI: 10.1038/d41586-021-00121-z. View

5.
Tenforde M, Self W, Adams K, Gaglani M, Ginde A, McNeal T . Association Between mRNA Vaccination and COVID-19 Hospitalization and Disease Severity. JAMA. 2021; 326(20):2043-2054. PMC: 8569602. DOI: 10.1001/jama.2021.19499. View