» Articles » PMID: 37209173

The Long Protostomic-type Cytoplasmic Intermediate Filament (cIF) Protein in Branchiostoma Supports the Phylogenetic Transition Between the Protostomic- and the Chordate-type CIFs

Overview
Journal Protoplasma
Publisher Springer
Specialty Biology
Date 2023 May 20
PMID 37209173
Authors
Affiliations
Soon will be listed here.
Abstract

We identified 23 and 20 cytoplasmic IF (cIF) genes in the two Branchiostoma belcheri and Branchiostoma lanceolatum cephalochordates, respectively. Combining these results with earlier data on the related Branchiostoma floridae, the following conclusions can be drawn. First, the Branchiostoma N4 protein with a long lamin-like coil 1B segment is the only protostomic-type cIF found so far in any analysed chordate or vertebrate organism. Second, Branchiostoma is the only organism known so far containing both the long protostomic- and the short chordate-prototypes of cIFs. This finding provides so far missing molecular evidence for the phylogenetic transition between the protostomic- and the chordate-type IF sequences at the base of the cephalochordates and vertebrates. Third, this finding also brings some support for another hypothesis, that the long protostomic-type cIF is subjected to evolutionary constraints in order to preclude inappropriate interactions with lamin and that the latter complexes might be prevented by a several heptad-long rod deletion, which released the selective constraints on it and promoted, at least in part, its expansion in nematodes, cephalochordates, and in vertebrates. Finally, here-presented data confirmed our previous results that cephalochordates do not have any vertebrate type III or type IV IF homolog.

Citing Articles

Missing links exploring transitions.

Nick P Protoplasma. 2023; 260(6):1469-1471.

PMID: 37847394 PMC: 10590288. DOI: 10.1007/s00709-023-01902-1.

References
1.
Aebi U, Cohn J, Buhle L, Gerace L . The nuclear lamina is a meshwork of intermediate-type filaments. Nature. 1986; 323(6088):560-4. DOI: 10.1038/323560a0. View

2.
Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F . Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 2008; 36(Web Server issue):W465-9. PMC: 2447785. DOI: 10.1093/nar/gkn180. View

3.
Doring V, Stick R . Gene structure of nuclear lamin LIII of Xenopus laevis; a model for the evolution of IF proteins from a lamin-like ancestor. EMBO J. 1990; 9(12):4073-81. PMC: 552180. DOI: 10.1002/j.1460-2075.1990.tb07629.x. View

4.
Erber A, Riemer D, Bovenschulte M, Weber K . Molecular phylogeny of metazoan intermediate filament proteins. J Mol Evol. 1998; 47(6):751-62. DOI: 10.1007/pl00006434. View

5.
Erber A, Riemer D, Hofemeister H, Bovenschulte M, Stick R, Panopoulou G . Characterization of the Hydra lamin and its gene: A molecular phylogeny of metazoan lamins. J Mol Evol. 1999; 49(2):260-71. DOI: 10.1007/pl00006548. View