» Articles » PMID: 36933185

Convergent Changes in Melanocortin Receptor 1 Gene Are Associated with Black-headed Coat Color in Sheep

Overview
Journal J Anim Sci
Date 2023 Mar 18
PMID 36933185
Authors
Affiliations
Soon will be listed here.
Abstract

As one of the most obvious phenotypic traits, the coat color of sheep is an ideal model to study the genetic mechanisms underlying coat color varieties of mammals. One distinguishable coat color is the black-headed type, such as the famous black-headed Dorper sheep from Africa and Bayinbuluke sheep from Asia. In this study, we compared the genome sequences of black-headed and all-white sheep to identify causative genes for the black-headed sheep, including black-headed Dorper vs. white-headed Dorper, as well as Bayinbuluke (black-headed) vs. Small-tailed Han (all-white). The most differentiating region between black-headed sheep and all-white sheep was found to harbor a haplotype covering melanocortin receptor 1 (MC1R) gene. The share of this haplotype by the black-headed sheep from Africa and Asia suggested that the convergent change in the MC1R region is likely to determine this unique coat color. Two missense mutations (g. 14251947T > A and g. 14252090G > A) within this haplotype of MC1R gene were found. We further analyzed whole genome sequence data of 460 worldwide sheep with diverse coat colors and confirmed the association between the MC1R haplotype with pigmentation variations. Our study provides novel insights into coat color genetics in sheep and expands our knowledge of the link between MC1R gene and varying pigmentation patterns in sheep.

Citing Articles

Genome-based analysis of the genetic pattern of black sheep in Qira sheep.

Zhou W, Li X, Zhang X, Zhu L, Peng Y, Zhang C BMC Genomics. 2025; 26(1):114.

PMID: 39915708 PMC: 11800528. DOI: 10.1186/s12864-025-11233-5.


Transcriptomic and Metabolomic Analyses Reveal Molecular Regulatory Networks for Pigmentation Deposition in Sheep.

Zhang M, Xu X, Chen Y, Wei C, Zhan S, Cao J Int J Mol Sci. 2024; 25(15).

PMID: 39125816 PMC: 11311981. DOI: 10.3390/ijms25158248.


Whole-Genome Sequencing for Identifying Candidate Genes Related to the Special Phenotypes of the Taihu Dianzi Pigeon.

Zhang R, Mu C, Chang L, Shen X, Bu Z, Yang M Animals (Basel). 2024; 14(7).

PMID: 38612286 PMC: 11011069. DOI: 10.3390/ani14071047.


Genome-wide detection of selection signatures in Jianli pigs reveals novel cis-regulatory haplotype in EDNRB associated with two-end black coat color.

Xu Z, Wu J, Zhang Y, Qiao M, Zhou J, Feng Y BMC Genomics. 2024; 25(1):23.

PMID: 38166718 PMC: 10763394. DOI: 10.1186/s12864-023-09943-9.


The Hoof Color of Australian White Sheep Is Associated with Genetic Variation of the Gene.

Su P, Wu H, Huang Y, Lu X, Yin J, Zhang Q Animals (Basel). 2023; 13(20).

PMID: 37893942 PMC: 10603658. DOI: 10.3390/ani13203218.

References
1.
Dong S, He W, Ji J, Zhang C, Guo Y, Yang T . LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on variant call format files. Brief Bioinform. 2020; 22(4). DOI: 10.1093/bib/bbaa227. View

2.
Hepp D, Goncalves G, Moreira G, de Freitas T . Epistatic Interaction of the Melanocortin 1 Receptor and Agouti Signaling Protein Genes Modulates Wool Color in the Brazilian Creole Sheep. J Hered. 2016; 107(6):544-52. DOI: 10.1093/jhered/esw037. View

3.
Lv F, Cao Y, Liu G, Luo L, Lu R, Liu M . Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci. Mol Biol Evol. 2021; 39(2). PMC: 8826587. DOI: 10.1093/molbev/msab353. View

4.
Rieder S . Molecular tests for coat colours in horses. J Anim Breed Genet. 2009; 126(6):415-24. DOI: 10.1111/j.1439-0388.2009.00832.x. View

5.
Rochus C, Tortereau F, Plisson-Petit F, Restoux G, Moreno-Romieux C, Tosser-Klopp G . Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep. BMC Genomics. 2018; 19(1):71. PMC: 5778797. DOI: 10.1186/s12864-018-4447-x. View