» Articles » PMID: 3671068

Deduced Products of C4-dicarboxylate Transport Regulatory Genes of Rhizobium Leguminosarum Are Homologous to Nitrogen Regulatory Gene Products

Overview
Specialty Biochemistry
Date 1987 Oct 12
PMID 3671068
Citations 80
Authors
Affiliations
Soon will be listed here.
Abstract

We have sequenced two genes dctB and dctD required for the activation of the C4-dicarboxylate transport structural gene dctA in free-living Rhizobium leguminosarum. The hydropathic profile of the dctB gene product (DctB) suggested that its N-terminal region may be located in the periplasm and its C-terminal region in the cytoplasm. The C-terminal region of DctB was strongly conserved with similar regions of the products of several regulatory genes that may act as environmental sensors, including ntrB, envZ, virA, phoR, cpxA, and phoM. The N-terminal domains of the products of several regulatory genes thought to be transcriptional activators, including ntrC, ompR, virG, phoB and sfrA. In addition, the central and C-terminal regions of DctD were strongly conserved with the products of ntrC and nifA, transcriptional activators that require the alternate sigma factor rpoN (ntrA) as co-activator. The central region of DctD also contained a potential ATP-binding domain. These results are consistent with recent results that show that rpoN product is required for dctA activation, and suggest that DctB plus DctD-mediated transcriptional activation of dctA may be mechanistically similar to NtrB plus NtrC-mediated activation of glnA in E. coli.

Citing Articles

Developmental downregulation of rhizobial genes as a function of symbiosome differentiation in symbiotic root nodules of Pisum sativum.

Tsyganov V, Voroshilova V, Herrera-Cervera J, Sanjuan-Pinilla J, Borisov A, Tikhonovich I New Phytol. 2021; 159(2):521-530.

PMID: 33873360 DOI: 10.1046/j.1469-8137.2003.00823.x.


Symbiosis islands of Loteae-nodulating comprise three radiating lineages with concordant gene complements and nodulation host-range groupings.

Perry B, Sullivan J, Colombi E, Murphy R, Ramsay J, Ronson C Microb Genom. 2020; 6(9).

PMID: 32845829 PMC: 7643969. DOI: 10.1099/mgen.0.000426.


Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for α-Ketoglutarate Utilization.

Tatke G, Kumari H, Silva-Herzog E, Ramirez L, Mathee K PLoS One. 2015; 10(6):e0129629.

PMID: 26114434 PMC: 4482717. DOI: 10.1371/journal.pone.0129629.


Molecular basis of the establishment and functioning of a N2-fixing root nodule.

Michiels J, Vanderleyden J World J Microbiol Biotechnol. 2014; 10(6):612-30.

PMID: 24421182 DOI: 10.1007/BF00327946.


Regulation of dct genes in the Rhizobium meliloti-alfalfa interaction.

Giblin L, Archdeacon J, OGara F World J Microbiol Biotechnol. 2014; 12(2):151-6.

PMID: 24415162 DOI: 10.1007/BF00364679.


References
1.
Johnson K, Parker M, Lory S . Nucleotide sequence and transcriptional initiation site of two Pseudomonas aeruginosa pilin genes. J Biol Chem. 1986; 261(33):15703-8. View

2.
Drummond M, Whitty P, Wootton J . Sequence and domain relationships of ntrC and nifA from Klebsiella pneumoniae: homologies to other regulatory proteins. EMBO J. 1986; 5(2):441-7. PMC: 1166750. DOI: 10.1002/j.1460-2075.1986.tb04230.x. View

3.
Makino K, Shinagawa H, Amemura M, Nakata A . Nucleotide sequence of the phoR gene, a regulatory gene for the phosphate regulon of Escherichia coli. J Mol Biol. 1986; 192(3):549-56. DOI: 10.1016/0022-2836(86)90275-5. View

4.
FERRARI F, Trach K, Lecoq D, Spence J, Ferrari E, Hoch J . Characterization of the spo0A locus and its deduced product. Proc Natl Acad Sci U S A. 1985; 82(9):2647-51. PMC: 397621. DOI: 10.1073/pnas.82.9.2647. View

5.
Fry D, KUBY S, Mildvan A . ATP-binding site of adenylate kinase: mechanistic implications of its homology with ras-encoded p21, F1-ATPase, and other nucleotide-binding proteins. Proc Natl Acad Sci U S A. 1986; 83(4):907-11. PMC: 322979. DOI: 10.1073/pnas.83.4.907. View