» Articles » PMID: 36591523

The Integrative Bioinformatics Approaches to Predict the Xanthohumol As Anti-breast Cancer Molecule: Targeting Cancer Cells Signaling PI3K and AKT Kinase Pathway

Abstract

Background: Breast cancer is the most common type of cancer in women, and vast research is being conducted throughout the world for the treatment of this malignancy by natural products using various computational approaches. Xanthohumol, a prenylated flavonoid, is known for its anticancer activity; however, the mechanism behind its action is still in the preliminary stage.

Methods: The current study aimed to analyze the efficacy of xanthohumol compared to the currently available anticancer drugs targeting phosphoinositide-3-kinase (PI3K), serine/threonine kinase (AKT) receptors, and human epidermal growth factor receptor 2 (HER2) for breast cancer treatment through analysis.

Results: The result revealed that the target compound showed significant binding affinity to targets within the PI3K, AKT, and HER2 signaling pathways with a binding energy of -7.5, -7.9, and -7.9 kcal/mol, respectively. Further prediction studies were then made concerning this compound's absorption, distribution, metabolism, and excretion (ADME) as well as drug-likeness properties, resulting in its oral bioavailability with only a single violation of Lipinski's rule of five.

Conclusions: The finding revealed the ability of xanthohumol to bind with multiple cancer cell signaling molecules including PI3K, AKT kinase, and HER2. The current novel study opened the door to advancing research into the management and treatment of breast cancer.

Citing Articles

DockEM: an enhanced method for atomic-scale protein-ligand docking refinement leveraging low-to-medium resolution cryo-EM density maps.

Zou J, Zhang W, Hu J, Zhou X, Zhang B Brief Bioinform. 2025; 26(2).

PMID: 40062618 PMC: 11891657. DOI: 10.1093/bib/bbaf091.


Prognostic risk modeling of endometrial cancer using programmed cell death-related genes: a comprehensive machine learning approach.

Chen T, Yang Y, Huang Z, Pan F, Xiao Z, Gong K Discov Oncol. 2025; 16(1):280.

PMID: 40056247 PMC: 11890841. DOI: 10.1007/s12672-025-02039-8.


Xanthohumol overcomes osimertinib resistance via governing ubiquitination-modulated Ets-1 turnover.

Ma Y, Wang R, Liao J, Guo P, Wang Q, Li W Cell Death Discov. 2024; 10(1):454.

PMID: 39468027 PMC: 11519634. DOI: 10.1038/s41420-024-02220-y.


Anticancer peptides from induced tumor-suppressing cells for inhibiting osteosarcoma cells.

Cui C, Huo Q, Xiong X, Li K, Ma P, Qiang G Am J Cancer Res. 2023; 13(9):4057-4072.

PMID: 37818062 PMC: 10560922.


Hop Flower Supercritical Carbon Dioxide Extracts Coupled with Carriers with Solubilizing Properties-Antioxidant Activity and Neuroprotective Potential.

Stasilowicz-Krzemien A, Cielecka-Piontek J Antioxidants (Basel). 2023; 12(9).

PMID: 37760025 PMC: 10525257. DOI: 10.3390/antiox12091722.


References
1.
Tarang S, Kesherwani V, LaTendresse B, Lindgren L, Rocha-Sanchez S, Weston M . In silico Design of a Multivalent Vaccine Against Candida albicans. Sci Rep. 2020; 10(1):1066. PMC: 6978452. DOI: 10.1038/s41598-020-57906-x. View

2.
Jiang C, Sun T, Xiang D, Wei S, Li W . Anticancer Activity and Mechanism of Xanthohumol: A Prenylated Flavonoid From Hops ( L.). Front Pharmacol. 2018; 9:530. PMC: 5972274. DOI: 10.3389/fphar.2018.00530. View

3.
Yoshimaru T, Komatsu M, Tashiro E, Imoto M, Osada H, Miyoshi Y . Xanthohumol suppresses oestrogen-signalling in breast cancer through the inhibition of BIG3-PHB2 interactions. Sci Rep. 2014; 4:7355. PMC: 4258681. DOI: 10.1038/srep07355. View

4.
Daina A, Michielin O, Zoete V . SwissADME: a free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules. Sci Rep. 2017; 7:42717. PMC: 5335600. DOI: 10.1038/srep42717. View

5.
Mehta R, Barlow W, Albain K, Vandenberg T, Dakhil S, Tirumali N . Overall Survival with Fulvestrant plus Anastrozole in Metastatic Breast Cancer. N Engl J Med. 2019; 380(13):1226-1234. PMC: 6885383. DOI: 10.1056/NEJMoa1811714. View