» Articles » PMID: 36320281

A Terpene Cyclase from is Involved in the Biosynthesis of Geosmin Precursor Germacradienol

Overview
Journal RSC Adv
Specialty Chemistry
Date 2022 Nov 2
PMID 36320281
Authors
Affiliations
Soon will be listed here.
Abstract

The earthy odor of geosmin with a C skeleton is known from bacteria, fungi and plants. The sesquiterpenoid germacradien-11-ol (germacradienol) is a crucial intermediate in the biosynthesis of geosmin. A bifunctional terpene cyclase for germacradienol formation and its degradation to geosmin had been described in bacteria. Terpene cyclases were also suggested for geosmin formation in basidiomycetes, but not reported for ascomycetes. We identified a putative terpene cyclase in with low sequence homology to N-termini of the bacterial germacradienol/geosmin synthases. Heterologous expression in and biochemical characterization led to the identification of the geosmin precursor germacradienol as the sole detected enzyme product. Germacradienol synthase (GdlS) uses strictly farnesyl diphosphate as substrate for cyclization and requires Mg for its reaction. Multiple sequence alignments with known enzymes indicate the presence of the highly conserved catalytic residues including the DDXXD motif for Mg binding. Phylogenetic analysis suggests different clades of bacterial germacradienol/geosmin synthases and terpene cyclases from fungi.

Citing Articles

A basidomycetous hydroxynaphthalene-prenylating enzyme exhibits promiscuity toward prenyl donors.

Martin A, Dierlamm N, Zocher G, Li S Appl Microbiol Biotechnol. 2023; 107(15):4845-4852.

PMID: 37326682 PMC: 10344970. DOI: 10.1007/s00253-023-12621-1.

References
1.
Zheng L, Wang H, Fan A, Li S . Oxepinamide F biosynthesis involves enzymatic D-aminoacyl epimerization, 3H-oxepin formation, and hydroxylation induced double bond migration. Nat Commun. 2020; 11(1):4914. PMC: 7530659. DOI: 10.1038/s41467-020-18713-0. View

2.
Pi B, Yu D, Dai F, Song X, Zhu C, Li H . A genomics based discovery of secondary metabolite biosynthetic gene clusters in Aspergillus ustus. PLoS One. 2015; 10(2):e0116089. PMC: 4338041. DOI: 10.1371/journal.pone.0116089. View

3.
Stierle S, Li S . Biosynthesis of Xylariolide D in Implies a Chain Branching Reaction Catalyzed by a Highly Reducing Polyketide Synthase. J Fungi (Basel). 2022; 8(5). PMC: 9147667. DOI: 10.3390/jof8050493. View

4.
Harris G, Lombardi P, Pemberton T, Matsui T, Weiss T, Cole K . Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with αα Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence. Biochemistry. 2015; 54(48):7142-55. PMC: 4674366. DOI: 10.1021/acs.biochem.5b01143. View

5.
Jiang J, He X, Cane D . Biosynthesis of the earthy odorant geosmin by a bifunctional Streptomyces coelicolor enzyme. Nat Chem Biol. 2007; 3(11):711-5. PMC: 3013058. DOI: 10.1038/nchembio.2007.29. View