» Articles » PMID: 36291937

Construction of a Prognostic and Early Diagnosis Model for LUAD Based on Necroptosis Gene Signature and Exploration of Immunotherapy Potential

Overview
Journal Cancers (Basel)
Publisher MDPI
Specialty Oncology
Date 2022 Oct 27
PMID 36291937
Authors
Affiliations
Soon will be listed here.
Abstract

Necroptosis is a type of programmed necrosis that is different from apoptosis and necrosis. Lung cancer has the highest incidence and mortality worldwide, and lung adenocarcinoma is the most common subtype of lung cancer. However, the role of necroptosis in the occurrence and development of LUAD remains largely unexplored. In this paper, four NRGs and nine NRGs determined by big data analysis were used to effectively predict the risk of early LUAD (AUC = 0.994) and evaluate the prognostic effect on LUAD patients (AUC = 0.826). Meanwhile, ESTIMATE, single-sample gene set enrichment analysis (ssGSEA), genomic variation analysis (GSVA), gene set enrichment analysis (GSEA), and immune checkpoint analysis were used to explore the enrichment characteristics and immune research related to the prognostic model. In deep data mining, we were surprised to find that prognostic models also regulate the immune microenvironment, cell cycle, and DNA damage repair mechanisms. Thus, we demonstrated a significant correlation between model evaluation results, ICI treatment, and chemotherapeutic drug sensitivity. The low-risk population has a stronger tumor immune response, and the potential for ICI treatment is greater. People at high risk respond less to immunotherapy but respond well to chemotherapy drugs. In addition, PANX1, a core gene with important value in immune regulation, prognosis assessment, and early diagnosis, has been identified for the first time, which provides a new target for the immunotherapy of LUAD as well as a new theoretical basis for the basic research, clinical diagnosis, and individualized treatment of LUAD.

Citing Articles

CRABP2 (Cellular Retinoic Acid Binding Protein 2D): A novel biomarker for the diagnosis and prognosis involved in immune infiltration of lung adenocarcinoma.

Cai D, Tian F, Zhang D, Tu J, Wang Y J Cancer. 2025; 16(5):1631-1646.

PMID: 39991584 PMC: 11843236. DOI: 10.7150/jca.96518.


Integration of the bulk transcriptome and single-cell transcriptome reveals efferocytosis features in lung adenocarcinoma prognosis and immunotherapy by combining deep learning.

Xie Y, Chen H, Zhang X, Zhang J, Zhang K, Wang X Cancer Cell Int. 2024; 24(1):388.

PMID: 39580462 PMC: 11585238. DOI: 10.1186/s12935-024-03571-3.


Machine-learning and scRNA-Seq-based diagnostic and prognostic models illustrating survival and therapy response of lung adenocarcinoma.

Cheng Q, Zhao W, Song X, Jin T Genes Immun. 2024; 25(5):356-366.

PMID: 39075270 DOI: 10.1038/s41435-024-00289-0.


Prognostic models for immunotherapy in non-small cell lung cancer: A comprehensive review.

Ni S, Liang Q, Jiang X, Ge Y, Jiang Y, Liu L Heliyon. 2024; 10(8):e29840.

PMID: 38681577 PMC: 11053285. DOI: 10.1016/j.heliyon.2024.e29840.

References
1.
Jia R, Sui Z, Zhang H, Yu Z . Identification and Validation of Immune-Related Gene Signature for Predicting Lymph Node Metastasis and Prognosis in Lung Adenocarcinoma. Front Mol Biosci. 2021; 8:679031. PMC: 8182055. DOI: 10.3389/fmolb.2021.679031. View

2.
Smyth P, Sessler T, Scott C, Longley D . FLIP(L): the pseudo-caspase. FEBS J. 2020; 287(19):4246-4260. PMC: 7586951. DOI: 10.1111/febs.15260. View

3.
Chan F, Luz N, Moriwaki K . Programmed necrosis in the cross talk of cell death and inflammation. Annu Rev Immunol. 2014; 33:79-106. PMC: 4394030. DOI: 10.1146/annurev-immunol-032414-112248. View

4.
Sayedyahossein S, Huang K, Li Z, Zhang C, Kozlov A, Johnston D . Pannexin 1 binds β-catenin to modulate melanoma cell growth and metabolism. J Biol Chem. 2021; 296:100478. PMC: 8027267. DOI: 10.1016/j.jbc.2021.100478. View

5.
Brueckl W, Ficker J, Zeitler G . Clinically relevant prognostic and predictive markers for immune-checkpoint-inhibitor (ICI) therapy in non-small cell lung cancer (NSCLC). BMC Cancer. 2020; 20(1):1185. PMC: 7713034. DOI: 10.1186/s12885-020-07690-8. View