Draft Genome Sequence of Sp. Strain ICN903, Isolated from a Seaweed
Overview
Overview
Journal
Microbiol Resour Announc
Publisher
American Society for Microbiology
Specialty
Microbiology
Date
2022 Aug 18
PMID
35980181
Authors
Affiliations
Affiliations
Soon will be listed here.
Abstract
Here, we report the whole-genome sequence of the actinomycete sp. strain ICN903, which was isolated from seaweed of the genus . The whole-genome assembly contained 6,122,654 bp with 73% GC content. In total, 19 biosynthetic gene clusters (BGCs), including polyketides and terpenes, were predicted within the sequenced genome.
References
1.
Yoon S, Ha S, Kwon S, Lim J, Kim Y, Seo H
. Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol. 2016; 67(5):1613-1617.
PMC: 5563544.
DOI: 10.1099/ijsem.0.001755.
View
2.
Tatusova T, DiCuccio M, Badretdin A, Chetvernin V, Nawrocki E, Zaslavsky L
. NCBI prokaryotic genome annotation pipeline. Nucleic Acids Res. 2016; 44(14):6614-24.
PMC: 5001611.
DOI: 10.1093/nar/gkw569.
View
3.
Bolger A, Lohse M, Usadel B
. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014; 30(15):2114-20.
PMC: 4103590.
DOI: 10.1093/bioinformatics/btu170.
View
4.
Subramani R, Aalbersberg W
. Marine actinomycetes: an ongoing source of novel bioactive metabolites. Microbiol Res. 2012; 167(10):571-80.
DOI: 10.1016/j.micres.2012.06.005.
View
5.
Simao F, Waterhouse R, Ioannidis P, Kriventseva E, Zdobnov E
. BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinformatics. 2015; 31(19):3210-2.
DOI: 10.1093/bioinformatics/btv351.
View