» Articles » PMID: 35869763

[Construction of an Adenovirus Vector Expressing Engineered Splicing Factor for Regulating Alternative Splicing of YAP1 in Neonatal Rat Cardiomyocytes]

Overview
Specialty General Medicine
Date 2022 Jul 23
PMID 35869763
Authors
Affiliations
Soon will be listed here.
Abstract

Objective: To construct an adenovirus vector expressing artificial splicing factor capable of regulating alternative splicing of Yap1 in cardiomyocytes.

Methods: The splicing factors with different sequences were constructed against Exon6 of YAP1 based on the sequence specificity of Pumilio1. The PCR fragment of the artificially synthesized PUF-SR or wild-type PUFSR was cloned into pAd-Track plasmid, and the recombinant plasmids were transformed into DH5 for plasmid amplification. The amplified plasmids were digested with I and transfected into 293A cells for packaging to obtain the adenovirus vectors. Cultured neonatal rat cardiomyocytes were transfected with the adenoviral vectors, and alternative splicing of YAP1 was detected using quantitative and semi-quantitative PCR; Western blotting was performed to detect the signal of the fusion protein Flag.

Results: The transfection efficiency of the adenovirus vectors was close to 100% in rat cardiomyocytes, and no fluorescent protein was detected in the cells with plasmid transfection. The results of Western blotting showed that both the negative control and Flag-SR-NLS-PUF targeting the YAPExon6XULIE sequence were capable of detecting the expression of the protein fused to Flag. The results of reverse transcription-PCR and PCR demonstrated that the artificial splicing factor constructed based on the 4th target sequence of YAP1 effectively regulated the splicing of YAP1 Exon6 in the cardiomyocytes ( < 0.05).

Conclusion: We successfully constructed adenovirus vectors capable of regulating YAP1 alternative splicing rat cardiomyocytes.

References
1.
Boutz P, Bhutkar A, Sharp P . Detained introns are a novel, widespread class of post-transcriptionally spliced introns. Genes Dev. 2015; 29(1):63-80. PMC: 4281565. DOI: 10.1101/gad.247361.114. View

2.
Ellis J, Barrios-Rodiles M, Colak R, Irimia M, Kim T, Calarco J . Tissue-specific alternative splicing remodels protein-protein interaction networks. Mol Cell. 2012; 46(6):884-92. DOI: 10.1016/j.molcel.2012.05.037. View

3.
Takeiwa T, Mitobe Y, Ikeda K, Horie-Inoue K, Inoue S . Roles of Splicing Factors in Hormone-Related Cancer Progression. Int J Mol Sci. 2020; 21(5). PMC: 7084890. DOI: 10.3390/ijms21051551. View

4.
Carazo F, Gimeno M, Ferrer-Bonsoms J, Rubio A . Integration of CLIP experiments of RNA-binding proteins: a novel approach to predict context-dependent splicing factors from transcriptomic data. BMC Genomics. 2019; 20(1):521. PMC: 6592009. DOI: 10.1186/s12864-019-5900-1. View

5.
Findley A, Monziani A, Richards A, Rhodes K, Ward M, Kalita C . Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions. Elife. 2021; 10. PMC: 8248987. DOI: 10.7554/eLife.67077. View