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Thirty Years of SRNA-Mediated Regulation in From Initial Discoveries to In Vivo Biological Implications

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2022 Jul 9
PMID 35806357
Authors
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Abstract

is a widespread livestock and human pathogen that colonizes diverse microenvironments within its host. Its adaptation to the environmental conditions encountered within humans relies on coordinated gene expression. This requires a sophisticated regulatory network, among which regulatory RNAs (usually called sRNAs) have emerged as key players over the last 30 years. In , sRNAs regulate target genes at the post-transcriptional level through base-pair interactions. The functional characterization of a subset revealed that they participate in all biological processes, including virulence, metabolic adaptation, and antibiotic resistance. In this review, we report 30 years of sRNA studies, from their discovery to the in-depth characterizations of some of them. We also discuss their actual in vivo contribution, which is still lagging behind, and their place within the complex regulatory network. These shall be key aspects to consider in order to clearly uncover their in vivo biological functions.

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References
1.
Tomasini A, Moreau K, Chicher J, Geissmann T, Vandenesch F, Romby P . The RNA targetome of Staphylococcus aureus non-coding RNA RsaA: impact on cell surface properties and defense mechanisms. Nucleic Acids Res. 2017; 45(11):6746-6760. PMC: 5499838. DOI: 10.1093/nar/gkx219. View

2.
Lauderdale K, Boles B, Cheung A, Horswill A . Interconnections between Sigma B, agr, and proteolytic activity in Staphylococcus aureus biofilm maturation. Infect Immun. 2009; 77(4):1623-35. PMC: 2663138. DOI: 10.1128/IAI.01036-08. View

3.
Carroll R, Weiss A, Broach W, Wiemels R, Mogen A, Rice K . Genome-wide Annotation, Identification, and Global Transcriptomic Analysis of Regulatory or Small RNA Gene Expression in Staphylococcus aureus. mBio. 2016; 7(1):e01990-15. PMC: 4752604. DOI: 10.1128/mBio.01990-15. View

4.
Schwan W, Langhorne M, Ritchie H, Stover C . Loss of hemolysin expression in Staphylococcus aureus agr mutants correlates with selective survival during mixed infections in murine abscesses and wounds. FEMS Immunol Med Microbiol. 2003; 38(1):23-8. DOI: 10.1016/S0928-8244(03)00098-1. View

5.
Felden B, Vandenesch F, Bouloc P, Romby P . The Staphylococcus aureus RNome and its commitment to virulence. PLoS Pathog. 2011; 7(3):e1002006. PMC: 3053349. DOI: 10.1371/journal.ppat.1002006. View