» Articles » PMID: 35736760

Serial-Omics and Molecular Function Study Provide Novel Insight into Cucumber Variety Improvement

Overview
Journal Plants (Basel)
Date 2022 Jun 23
PMID 35736760
Authors
Affiliations
Soon will be listed here.
Abstract

Cucumbers are rich in vitamins and minerals. The cucumber has recently become one of China's main vegetable crops. More specifically, the adjustment of the Chinese agricultural industry's structure and rapid economic development have resulted in increases in the planting area allocated to Chinese cucumber varieties and in the number of Chinese cucumber varieties. After complete sequencing of the "Chinese long" genome, the transcriptome, proteome, and metabolome were obtained. Cucumber has a small genome and short growing cycle, and these traits are conducive to the application of molecular breeding techniques for improving fruit quality. Here, we review the developments and applications of molecular markers and genetic maps for cucumber breeding and introduce the functions of gene families from the perspective of genomics, including fruit development and quality, hormone response, resistance to abiotic stress, epitomizing the development of other omics, and relationships among functions.

References
1.
Yan S, Che G, Ding L, Chen Z, Liu X, Wang H . Different cucumber CsYUC genes regulate response to abiotic stresses and flower development. Sci Rep. 2016; 6:20760. PMC: 4746583. DOI: 10.1038/srep20760. View

2.
Yang X, Zhang W, He H, Nie J, Bie B, Zhao J . Tuberculate fruit gene Tu encodes a C2 H2 zinc finger protein that is required for the warty fruit phenotype in cucumber (Cucumis sativus L.). Plant J. 2014; 78(6):1034-46. DOI: 10.1111/tpj.12531. View

3.
Liang C, Jaiswal P, Hebbard C, Avraham S, Buckler E, Casstevens T . Gramene: a growing plant comparative genomics resource. Nucleic Acids Res. 2007; 36(Database issue):D947-53. PMC: 2238951. DOI: 10.1093/nar/gkm968. View

4.
Yuan M, Huang Y, Ge W, Jia Z, Song S, Zhang L . Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber. BMC Genomics. 2019; 20(1):144. PMC: 6379975. DOI: 10.1186/s12864-019-5513-8. View

5.
Liu X, Wang T, Bartholomew E, Black K, Dong M, Zhang Y . Comprehensive analysis of NAC transcription factors and their expression during fruit spine development in cucumber ( L.). Hortic Res. 2018; 5:31. PMC: 5981648. DOI: 10.1038/s41438-018-0036-z. View