» Articles » PMID: 35487911

Regulation of Chromatin Accessibility by the Histone Chaperone CAF-1 Sustains Lineage Fidelity

Abstract

Cell fate commitment is driven by dynamic changes in chromatin architecture and activity of lineage-specific transcription factors (TFs). The chromatin assembly factor-1 (CAF-1) is a histone chaperone that regulates chromatin architecture by facilitating nucleosome assembly during DNA replication. Accumulating evidence supports a substantial role of CAF-1 in cell fate maintenance, but the mechanisms by which CAF-1 restricts lineage choice remain poorly understood. Here, we investigate how CAF-1 influences chromatin dynamics and TF activity during lineage differentiation. We show that CAF-1 suppression triggers rapid differentiation of myeloid stem and progenitor cells into a mixed lineage state. We find that CAF-1 sustains lineage fidelity by controlling chromatin accessibility at specific loci, and limiting the binding of ELF1 TF at newly-accessible diverging regulatory elements. Together, our findings decipher key traits of chromatin accessibility that sustain lineage integrity and point to a powerful strategy for dissecting transcriptional circuits central to cell fate commitment.

Citing Articles

Escape of Kdm6a from X Chromosome Is Detrimental to Ischemic Brains via IRF5 Signaling.

Ngwa C, Misrani A, Manyam K, Xu Y, Qi S, Sharmeen R Transl Stroke Res. 2025; .

PMID: 39752046 DOI: 10.1007/s12975-024-01321-1.


Transcriptional Landscape of Cotton Roots in Response to Salt Stress at Single-cell Resolution.

Li P, Liu Q, Wei Y, Xing C, Xu Z, Ding F Plant Commun. 2024; :100740.

PMID: 39492159 PMC: 10873896. DOI: 10.1016/j.xplc.2023.100740.


Escape of Kdm6a from X chromosome is detrimental to ischemic brains via IRF5 signaling.

Ngwa C, Misrani A, Manyam K, Xu Y, Qi S, Sharmeen R Res Sq. 2024; .

PMID: 39399684 PMC: 11469404. DOI: 10.21203/rs.3.rs-4986866/v1.


Manipulating cell fate through reprogramming: approaches and applications.

Yagi M, Horng J, Hochedlinger K Development. 2024; 151(19).

PMID: 39348466 PMC: 11463964. DOI: 10.1242/dev.203090.


CRISPR screen of venetoclax response-associated genes identifies transcription factor ZNF740 as a key functional regulator.

Zhang L, Zhou X, Aryal S, Veasey V, Zhang P, Li F Cell Death Dis. 2024; 15(8):627.

PMID: 39191721 PMC: 11350041. DOI: 10.1038/s41419-024-06995-x.


References
1.
Zhang Y, Gao S, Xia J, Liu F . Hematopoietic Hierarchy - An Updated Roadmap. Trends Cell Biol. 2018; 28(12):976-986. DOI: 10.1016/j.tcb.2018.06.001. View

2.
Heyworth C, Pearson S, May G, Enver T . Transcription factor-mediated lineage switching reveals plasticity in primary committed progenitor cells. EMBO J. 2002; 21(14):3770-81. PMC: 126114. DOI: 10.1093/emboj/cdf368. View

3.
Suico M, Shuto T, Kai H . Roles and regulations of the ETS transcription factor ELF4/MEF. J Mol Cell Biol. 2016; 9(3):168-177. PMC: 5907832. DOI: 10.1093/jmcb/mjw051. View

4.
Zhang H, Zhang Y, Zhou X, Wright S, Hyle J, Zhao L . Functional interrogation of HOXA9 regulome in MLLr leukemia via reporter-based CRISPR/Cas9 screen. Elife. 2020; 9. PMC: 7599066. DOI: 10.7554/eLife.57858. View

5.
Tang Y, Zhao L, Yu X, Zhang J, Qian L, Jin J . Inhibition of EZH2 primes the cardiac gene activation via removal of epigenetic repression during human direct cardiac reprogramming. Stem Cell Res. 2021; 53:102365. PMC: 8238038. DOI: 10.1016/j.scr.2021.102365. View