» Articles » PMID: 35432289

Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of

Overview
Journal Front Microbiol
Specialty Microbiology
Date 2022 Apr 18
PMID 35432289
Authors
Affiliations
Soon will be listed here.
Abstract

Rhizosphere microbiome promotes plant growth; however, the succession of rhizosphere microbial community during the growth stages of perennial medicinal plant () is still unclear. Here, amplicon sequencing was performed to assess the succession characteristics of rhizosphere microbiomes during developmental stages. Results showed that bacterial and fungal communities were mainly shaped by the development stages. The microbial α-diversities first increased and then decreased with plant growth and the variation in microbial composition was active at the 3-year root growth (3YR) stage. The variation trend of cross-domain co-occurrence network complexity was similar to that of α-diversities. Cross-domain nodes decreased at the 3YR stage and fungal nodes increased at the 3YR stage. This study provided a detailed and systematic survey of rhizosphere microbiomes during the growth stages of . The findings revealed that the development stages of drove the temporal dynamics of rhizosphere communities. This study helps in harnessing the power of microbiomes to evaluate herbal medicine growth and provides valuable information to guide the microbial breeding of medical plants.

Citing Articles

Insights from DNA Barcodes-Based Phylogenetic Analysis of Medicinal Plants and Estimation of Their Conservation Status: A Case Study in the Tianshan Wild Forest, China.

Jiamahate A, Bozorov T, Wang J, Zhang J, Zhang H, Wang X Plants (Basel). 2025; 14(1.

PMID: 39795359 PMC: 11723300. DOI: 10.3390/plants14010099.


Understanding the influence of plant genetic factors on rhizosphere microbiome assembly in .

Shi L, Yang M, Wei G, Wei X, Hong F, Ma J Front Microbiol. 2024; 15:1479580.

PMID: 39736990 PMC: 11683141. DOI: 10.3389/fmicb.2024.1479580.


Beyond correlation: Understanding the causal link between microbiome and plant health.

Olanrewaju O, Glick B, Babalola O Heliyon. 2024; 10(23):e40517.

PMID: 39669148 PMC: 11636107. DOI: 10.1016/j.heliyon.2024.e40517.


Temporal heterogeneity of the root microbiome in soils across ecological compartments under mild soil disturbance.

Shi Z, Yang L, Yang M, Li K, Yang L, Han M Front Microbiol. 2024; 15:1340575.

PMID: 38919496 PMC: 11196636. DOI: 10.3389/fmicb.2024.1340575.


High-throughput sequencing-based analysis of the composition and diversity of the endophyte community in roots of Stellera chamaejasme.

Zhang J, Li X, Yin Y, Luo S, Wang D, Zheng H Sci Rep. 2024; 14(1):8607.

PMID: 38615120 PMC: 11016073. DOI: 10.1038/s41598-024-59055-x.


References
1.
Dong L, Xu J, Feng G, Li X, Chen S . Soil bacterial and fungal community dynamics in relation to Panax notoginseng death rate in a continuous cropping system. Sci Rep. 2016; 6:31802. PMC: 4994099. DOI: 10.1038/srep31802. View

2.
Chaparro J, Badri D, Vivanco J . Rhizosphere microbiome assemblage is affected by plant development. ISME J. 2013; 8(4):790-803. PMC: 3960538. DOI: 10.1038/ismej.2013.196. View

3.
Ma B, Wang H, DSouza M, Lou J, He Y, Dai Z . Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China. ISME J. 2016; 10(8):1891-901. PMC: 5029158. DOI: 10.1038/ismej.2015.261. View

4.
Zhalnina K, Louie K, Hao Z, Mansoori N, da Rocha U, Shi S . Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly. Nat Microbiol. 2018; 3(4):470-480. DOI: 10.1038/s41564-018-0129-3. View

5.
Heuberger H, Bauer R, Friedl F, Heubl G, Hummelsberger J, Nogel R . Cultivation and breeding of Chinese medicinal plants in Germany. Planta Med. 2010; 76(17):1956-62. DOI: 10.1055/s-0030-1250528. View