» Articles » PMID: 35027566

Hierarchically Encapsulating Enzymes with Multi-shelled Metal-organic Frameworks for Tandem Biocatalytic Reactions

Overview
Journal Nat Commun
Specialty Biology
Date 2022 Jan 14
PMID 35027566
Authors
Affiliations
Soon will be listed here.
Abstract

Biocatalytic transformations in living organisms, such as multi-enzyme catalytic cascades, proceed in different cellular membrane-compartmentalized organelles with high efficiency. Nevertheless, it remains challenging to mimicking biocatalytic cascade processes in natural systems. Herein, we demonstrate that multi-shelled metal-organic frameworks (MOFs) can be used as a hierarchical scaffold to spatially organize enzymes on nanoscale to enhance cascade catalytic efficiency. Encapsulating multi-enzymes with multi-shelled MOFs by epitaxial shell-by-shell overgrowth leads to 5.8~13.5-fold enhancements in catalytic efficiencies compared with free enzymes in solution. Importantly, multi-shelled MOFs can act as a multi-spatial-compartmental nanoreactor that allows physically compartmentalize multiple enzymes in a single MOF nanoparticle for operating incompatible tandem biocatalytic reaction in one pot. Additionally, we use nanoscale Fourier transform infrared (nano-FTIR) spectroscopy to resolve nanoscale heterogeneity of vibrational activity associated to enzymes encapsulated in multi-shelled MOFs. Furthermore, multi-shelled MOFs enable facile control of multi-enzyme positions according to specific tandem reaction routes, in which close positioning of enzyme-1-loaded and enzyme-2-loaded shells along the inner-to-outer shells could effectively facilitate mass transportation to promote efficient tandem biocatalytic reaction. This work is anticipated to shed new light on designing efficient multi-enzyme catalytic cascades to encourage applications in many chemical and pharmaceutical industrial processes.

Citing Articles

Recent Progress in Enzyme Immobilization to Metal-Organic Frameworks to Enhance the CO Conversion Efficiency.

Cao Y, Yang P, Zhao R, Wang F Molecules. 2025; 30(2).

PMID: 39860121 PMC: 11767415. DOI: 10.3390/molecules30020251.


Organic and Metal-Organic Polymer-Based Catalysts-Enfant Terrible Companions or Good Assistants?.

Kralik M, Koos P, Markovic M, Lopatka P Molecules. 2024; 29(19).

PMID: 39407552 PMC: 11477782. DOI: 10.3390/molecules29194623.


Molecular mechanics studies of factors affecting overall rate in cascade reactions: Multi-enzyme colocalization and environment.

Kaushik S, Hung T, Chang C Protein Sci. 2024; 33(10):e5175.

PMID: 39276014 PMC: 11401055. DOI: 10.1002/pro.5175.


Evaluating Nondestructive Quantification of Composition Gradients in Metal-Organic Frameworks by MeV Ion Microbeam Analysis.

Nagy G, Gschwind W, Ott S, Primetzhofer D Anal Chem. 2024; .

PMID: 39252499 PMC: 11428091. DOI: 10.1021/acs.analchem.4c02730.


Preparation and application of single-atom nanozymes in oncology: a review.

Liang H, Xian Y, Wang X Front Chem. 2024; 12:1442689.

PMID: 39189019 PMC: 11345252. DOI: 10.3389/fchem.2024.1442689.


References
1.
Good M, Zalatan J, Lim W . Scaffold proteins: hubs for controlling the flow of cellular information. Science. 2011; 332(6030):680-6. PMC: 3117218. DOI: 10.1126/science.1198701. View

2.
Quin M, Wallin K, Zhang G, Schmidt-Dannert C . Spatial organization of multi-enzyme biocatalytic cascades. Org Biomol Chem. 2017; 15(20):4260-4271. DOI: 10.1039/c7ob00391a. View

3.
Savage D, Afonso B, Chen A, Silver P . Spatially ordered dynamics of the bacterial carbon fixation machinery. Science. 2010; 327(5970):1258-61. DOI: 10.1126/science.1186090. View

4.
Schoonen L, van Hest J . Compartmentalization Approaches in Soft Matter Science: From Nanoreactor Development to Organelle Mimics. Adv Mater. 2015; 28(6):1109-28. DOI: 10.1002/adma.201502389. View

5.
Chen A, Silver P . Designing biological compartmentalization. Trends Cell Biol. 2012; 22(12):662-70. DOI: 10.1016/j.tcb.2012.07.002. View