» Articles » PMID: 34744680

A Quantitative Perspective of Alpha-Synuclein Dynamics - Why Numbers Matter

Overview
Date 2021 Nov 8
PMID 34744680
Citations 2
Authors
Affiliations
Soon will be listed here.
Abstract

The function of synapses depends on spatially and temporally controlled molecular interactions between synaptic components that can be described in terms of copy numbers, binding affinities, and diffusion properties. To understand the functional role of a given synaptic protein, it is therefore crucial to quantitatively characterise its biophysical behaviour in its native cellular environment. Single molecule localisation microscopy (SMLM) is ideally suited to obtain quantitative information about synaptic proteins on the nanometre scale. Molecule counting of recombinant proteins tagged with genetically encoded fluorophores offers a means to determine their absolute copy numbers at synapses due to the known stoichiometry of the labelling. As a consequence of its high spatial precision, SMLM also yields accurate quantitative measurements of molecule concentrations. In addition, live imaging of fluorescently tagged proteins at synapses can reveal diffusion dynamics and local binding properties of behaving proteins under normal conditions or during pathological processes. In this perspective, it is argued that the detailed structural information provided by super-resolution imaging can be harnessed to gain new quantitative information about the organisation and dynamics of synaptic components . To illustrate this point, I discuss the concentration-dependent aggregation of α-synuclein in the axon and the concomitant changes in the dynamic equilibrium of α-synuclein at synapses in quantitative terms.

Citing Articles

Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics.

Verdier H, Laurent F, Casse A, Vestergaard C, Specht C, Masson J PLoS Comput Biol. 2023; 19(2):e1010088.

PMID: 36730436 PMC: 9928078. DOI: 10.1371/journal.pcbi.1010088.


DisPhaseDB: An integrative database of diseases related variations in liquid-liquid phase separation proteins.

Navarro A, Orti F, Martinez-Perez E, Alonso M, Simonetti F, Iserte J Comput Struct Biotechnol J. 2022; 20:2551-2557.

PMID: 35685370 PMC: 9156858. DOI: 10.1016/j.csbj.2022.05.004.

References
1.
Specht C, Tigaret C, Rast G, Thalhammer A, Rudhard Y, Schoepfer R . Subcellular localisation of recombinant alpha- and gamma-synuclein. Mol Cell Neurosci. 2005; 28(2):326-34. DOI: 10.1016/j.mcn.2004.09.017. View

2.
Ibanez P, Bonnet A, Debarges B, Lohmann E, Tison F, Pollak P . Causal relation between alpha-synuclein gene duplication and familial Parkinson's disease. Lancet. 2004; 364(9440):1169-71. DOI: 10.1016/S0140-6736(04)17104-3. View

3.
Spillantini M, Schmidt M, Lee V, Trojanowski J, Jakes R, Goedert M . Alpha-synuclein in Lewy bodies. Nature. 1997; 388(6645):839-40. DOI: 10.1038/42166. View

4.
Xu K, Zhong G, Zhuang X . Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons. Science. 2012; 339(6118):452-6. PMC: 3815867. DOI: 10.1126/science.1232251. View

5.
Connor-Robson N, Peters O, Millership S, Ninkina N, Buchman V . Combinational losses of synucleins reveal their differential requirements for compensating age-dependent alterations in motor behavior and dopamine metabolism. Neurobiol Aging. 2016; 46:107-12. PMC: 5021248. DOI: 10.1016/j.neurobiolaging.2016.06.020. View