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A Core Transcription Regulatory Circuitry Defining Microglia Cell Identity Inferred from the Reanalysis of Multiple Human Microglia Differentiation Protocols

Overview
Journal Brain Sci
Publisher MDPI
Date 2021 Oct 23
PMID 34679401
Citations 1
Authors
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Abstract

Microglia, the immune cells in the brain involved in both homeostasis and injury/infection control, play a predominant role in neurodegenerative diseases. In vivo studies on microglia are limited due to the requirement of surgical intervention, which can lead to the destruction of the tissues. Over the last few years, multiple protocols-presenting a variety of strategies-have described microglia differentiation issued from human pluripotent stem cells. Herein, we have reanalyzed the transcriptomes released on six different microglia differentiation protocols and revealed a consensus core of master transcription regulatory circuitry defining microglia identity. Furthermore, we have discussed the major divergencies among the studied protocols and have provided suggestions to further enhance microglia differentiation assays.

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References
1.
Pandya H, Shen M, Ichikawa D, Sedlock A, Choi Y, Johnson K . Differentiation of human and murine induced pluripotent stem cells to microglia-like cells. Nat Neurosci. 2017; 20(5):753-759. PMC: 5404968. DOI: 10.1038/nn.4534. View

2.
Chen E, Tan C, Kou Y, Duan Q, Wang Z, Meirelles G . Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013; 14:128. PMC: 3637064. DOI: 10.1186/1471-2105-14-128. View

3.
Sousa C, Biber K, Michelucci A . Cellular and Molecular Characterization of Microglia: A Unique Immune Cell Population. Front Immunol. 2017; 8:198. PMC: 5332364. DOI: 10.3389/fimmu.2017.00198. View

4.
Cserep C, Posfai B, Lenart N, Fekete R, Laszlo Z, Lele Z . Microglia monitor and protect neuronal function through specialized somatic purinergic junctions. Science. 2019; 367(6477):528-537. DOI: 10.1126/science.aax6752. View

5.
Davis T, Rebay I . Master regulators in development: Views from the Drosophila retinal determination and mammalian pluripotency gene networks. Dev Biol. 2016; 421(2):93-107. PMC: 5496713. DOI: 10.1016/j.ydbio.2016.12.005. View