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Mutations and Effects on Rifampin Resistance in

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Publisher Dove Medical Press
Date 2021 Oct 22
PMID 34675557
Citations 27
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Abstract

Objective: To investigate the mutations within the whole gene of and analyze their effects on rifampin (RIF) resistance based on crystal structure.

Methods: We sequenced the entire gene in 175 tuberculosis isolates and quantified their minimum inhibitory concentrations using microplate-based assays. Additionally, the structural interactions between wild-type/mutant RpoB and RIF were also analyzed.

Results: Results revealed that a total of 34 mutations distributed across 17 different sites within the whole gene were identified. Of the 34 mutations, 25 could alter the structural interaction between RpoB and RIF and contribute to RIF resistance. Statistical analysis showed that S450L, H445D, H445Y and H445R mutations were associated with high-level RIF resistance, while D435V was associated with moderate-level RIF resistance.

Conclusion: Some mutations within the gene could affect the interaction between RpoB and RIF and thus are associated with RIF resistance. These findings could be helpful to design new antibiotics and develop novel diagnostic tools for drug resistance in TB.

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References
1.
Sun Q, Xiao T, Liu H, Zhao X, Liu Z, Li Y . Mutations within Are Associated with Variable Level of Ethambutol Resistance in Mycobacterium tuberculosis Isolates from China. Antimicrob Agents Chemother. 2017; 62(1). PMC: 5740351. DOI: 10.1128/AAC.01279-17. View

2.
Rothman-Denes L . Structure of Escherichia coli RNA polymerase holoenzyme at last. Proc Natl Acad Sci U S A. 2013; 110(49):19662-3. PMC: 3856807. DOI: 10.1073/pnas.1320604110. View

3.
Ning Q, Wang D, Cheng F, Zhong Y, Ding Q, You J . Predicting rifampicin resistance mutations in bacterial RNA polymerase subunit beta based on majority consensus. BMC Bioinformatics. 2021; 22(1):210. PMC: 8063314. DOI: 10.1186/s12859-021-04137-0. View

4.
Xu G, Liu H, Jia X, Wang X, Xu P . Mechanisms and detection methods of Mycobacterium tuberculosis rifampicin resistance: The phenomenon of drug resistance is complex. Tuberculosis (Edinb). 2021; 128:102083. DOI: 10.1016/j.tube.2021.102083. View

5.
Mohajeri P, Sadri H, Farahani A, Norozi B, Atashi S . Frequency of Mutations Associated with Rifampicin Resistance in Mycobacterium tuberculosis Strains Isolated from Patients in West of Iran. Microb Drug Resist. 2014; 21(3):315-9. DOI: 10.1089/mdr.2014.0075. View