Kochavi A, Nagel R, Korner P, Bleijerveld O, Lin C, Huinen Z
Nucleic Acids Res. 2024; 52(22):13964-13979.
PMID: 39588782
PMC: 11662694.
DOI: 10.1093/nar/gkae1110.
Ojha R, Tantray I, Banerjee S, Rimal S, Thirunavukkarasu S, Srikrishna S
Res Sq. 2024; .
PMID: 39315278
PMC: 11419255.
DOI: 10.21203/rs.3.rs-4899860/v1.
Deutsch E, Kok L, Mudge J, Ruiz-Orera J, Fierro-Monti I, Sun Z
bioRxiv. 2024; .
PMID: 39314370
PMC: 11419116.
DOI: 10.1101/2024.09.09.612016.
Zheng Z, Zhong C, Wei C, Chen X, Chen G, Nie R
Adv Sci (Weinh). 2024; 11(35):e2402284.
PMID: 38994917
PMC: 11425274.
DOI: 10.1002/advs.202402284.
Ramalho S, Dopler A, Faller W
NAR Cancer. 2024; 6(3):zcae029.
PMID: 38989007
PMC: 11231584.
DOI: 10.1093/narcan/zcae029.
Evidence for widespread translation of 5' untranslated regions.
Rodriguez J, Abascal F, Cerdan-Velez D, Gomez L, Vazquez J, Tress M
Nucleic Acids Res. 2024; 52(14):8112-8126.
PMID: 38953162
PMC: 11317171.
DOI: 10.1093/nar/gkae571.
The high-affinity tryptophan uptake transport system in human cells.
Wakasugi K, Yokosawa T
Biochem Soc Trans. 2024; 52(3):1149-1158.
PMID: 38813870
PMC: 11346423.
DOI: 10.1042/BST20230742.
Molecular mechanisms of non-genetic aberrant peptide production in cancer.
Wernaart D, Fumagalli A, Agami R
Oncogene. 2024; 43(27):2053-2062.
PMID: 38802646
DOI: 10.1038/s41388-024-03069-2.
Upstream open reading frames: new players in the landscape of cancer gene regulation.
Dasgupta A, Prensner J
NAR Cancer. 2024; 6(2):zcae023.
PMID: 38774471
PMC: 11106035.
DOI: 10.1093/narcan/zcae023.
Tryptophan fuels MYC-dependent liver tumorigenesis through indole 3-pyruvate synthesis.
Venkateswaran N, Garcia R, Lafita-Navarro M, Hao Y, Perez-Castro L, Nogueira P
Nat Commun. 2024; 15(1):4266.
PMID: 38769298
PMC: 11106337.
DOI: 10.1038/s41467-024-47868-3.
Arginine deprivation enriches lung cancer proteomes with cysteine by inducing arginine-to-cysteine substitutants.
Yang C, Pataskar A, Feng X, Montenegro Navarro J, Paniagua I, Jacobs J
Mol Cell. 2024; 84(10):1904-1916.e7.
PMID: 38759626
PMC: 11129317.
DOI: 10.1016/j.molcel.2024.04.012.
Tumor Antigens beyond the Human Exome.
Emilius L, Bremm F, Binder A, Schaft N, Dorrie J
Int J Mol Sci. 2024; 25(9).
PMID: 38731892
PMC: 11083240.
DOI: 10.3390/ijms25094673.
Relevance of mutation-derived neoantigens and non-classical antigens for anticancer therapies.
Aparicio B, Theunissen P, Hervas-Stubbs S, Fortes P, Sarobe P
Hum Vaccin Immunother. 2024; 20(1):2303799.
PMID: 38346926
PMC: 10863374.
DOI: 10.1080/21645515.2024.2303799.
Ribosomal frameshifting at normal codon repeats recodes functional chimeric proteins in human.
Ren G, Gu X, Zhang L, Gong S, Song S, Chen S
Nucleic Acids Res. 2024; 52(5):2463-2479.
PMID: 38281188
PMC: 10954444.
DOI: 10.1093/nar/gkae035.
SUMOylation-Driven mRNA Circularization Enhances Translation and Promotes Lymphatic Metastasis of Bladder Cancer.
Zhao Y, Chen J, Zheng H, Luo Y, An M, Lin Y
Cancer Res. 2023; 84(3):434-448.
PMID: 37991737
PMC: 10831341.
DOI: 10.1158/0008-5472.CAN-23-2278.
Tryptophan-Starved Human Cells Overexpressing Tryptophanyl-tRNA Synthetase Enhance High-Affinity Tryptophan Uptake via Enzymatic Production of Tryptophanyl-AMP.
Yokosawa T, Wakasugi K
Int J Mol Sci. 2023; 24(20).
PMID: 37895133
PMC: 10607379.
DOI: 10.3390/ijms242015453.
What Can Ribo-Seq, Immunopeptidomics, and Proteomics Tell Us About the Noncanonical Proteome?.
Prensner J, Abelin J, Kok L, Clauser K, Mudge J, Ruiz-Orera J
Mol Cell Proteomics. 2023; 22(9):100631.
PMID: 37572790
PMC: 10506109.
DOI: 10.1016/j.mcpro.2023.100631.
What can Ribo-seq and proteomics tell us about the non-canonical proteome?.
Prensner J, Abelin J, Kok L, Clauser K, Mudge J, Ruiz-Orera J
bioRxiv. 2023; .
PMID: 37292611
PMC: 10245706.
DOI: 10.1101/2023.05.16.541049.
Game of Omes: ribosome profiling expands the MHC-I immunopeptidome.
Holly J, Yewdell J
Curr Opin Immunol. 2023; 83:102342.
PMID: 37247567
PMC: 10524008.
DOI: 10.1016/j.coi.2023.102342.
The bridge of the gut-joint axis: Gut microbial metabolites in rheumatoid arthritis.
Xu X, Wang M, Wang Z, Chen Q, Chen X, Xu Y
Front Immunol. 2022; 13:1007610.
PMID: 36275747
PMC: 9583880.
DOI: 10.3389/fimmu.2022.1007610.