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Genome-Wide DNA Methylation Pattern in Whole Blood Associated With Primary Intracerebral Hemorrhage

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Journal Front Immunol
Date 2021 Sep 6
PMID 34484198
Citations 8
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Abstract

Primary intracerebral hemorrhage (ICH) is a significant cause of morbidity and mortality throughout the world. ICH is a multifactorial disease that emerges from interactions among multiple genetic and environmental factors. DNA methylation plays an important role in the etiology of complex traits and diseases. We used the Illumina Infinium Human Methylation 850k BeadChip to detect changes in DNA methylation in peripheral blood samples from patients with ICH and healthy controls to explore DNA methylation patterns in ICH. Here, we compared genomic DNA methylation patterns in whole blood from ICH patients (n = 30) and controls (n = 34). The ICH and control groups showed significantly different DNA methylation patterns at 1530 sites (p-value < 5.92E-08), with 1377 hypermethylated sites and 153 hypomethylated sites in ICH patients compared to the methylation status in healthy controls. A total of 371 hypermethylated sites and 35 hypomethylated sites were in promoters, while 738 hypermethylated sites and 67 hypomethylated sites were in coding regions. Furthermore, the differentially methylated genes between ICH patients and controls were largely related to inflammatory pathways. Abnormalities in the DNA methylation pattern identified in the peripheral blood of ICH patients may play an important role in the development of ICH and warranted further investigation.

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References
1.
Qureshi A, Mendelow A, Hanley D . Intracerebral haemorrhage. Lancet. 2009; 373(9675):1632-44. PMC: 3138486. DOI: 10.1016/S0140-6736(09)60371-8. View

2.
Carpenter A, Singh I, Gandhi C, Prestigiacomo C . Genetic risk factors for spontaneous intracerebral haemorrhage. Nat Rev Neurol. 2015; 12(1):40-9. DOI: 10.1038/nrneurol.2015.226. View

3.
Kumar P, Kumar A, Misra S, Sagar R, Farooq M, Kumari R . Association of transforming growth factor-β1 gene C509T, G800A and T869C polymorphisms with intracerebral hemorrhage in North Indian Population: a case-control study. Neurol Sci. 2015; 37(3):353-9. DOI: 10.1007/s10072-015-2426-4. View

4.
Tang Y, Han S, Asakawa T, Luo Y, Han X, Xiao B . Effects of intracerebral hemorrhage on 5-hydroxymethylcytosine modification in mouse brains. Neuropsychiatr Dis Treat. 2016; 12:617-24. PMC: 4801193. DOI: 10.2147/NDT.S97456. View

5.
Sutherland C, Chalupny N, Schooley K, VandenBos T, Kubin M, Cosman D . UL16-binding proteins, novel MHC class I-related proteins, bind to NKG2D and activate multiple signaling pathways in primary NK cells. J Immunol. 2002; 168(2):671-9. DOI: 10.4049/jimmunol.168.2.671. View