» Articles » PMID: 34440409

QTL Genetic Mapping Study for Traits Affecting Meal Quality in Winter Oilseed Rape ( L.)

Overview
Journal Genes (Basel)
Publisher MDPI
Date 2021 Aug 27
PMID 34440409
Citations 2
Authors
Affiliations
Soon will be listed here.
Abstract

Rapeseed ( L.) meal is an important source of protein, but the presence of anti-nutritional compounds, such as fibre and glucosinolates, still limits its use as a livestock feed. Understanding the genetic basis of seed fibre biosynthesis would help to manipulate its content in seeds of oilseed rape. Here, we applied high-resolution skim genotyping by sequencing (SkimGBS) and characterised 187,835 single-nucleotide polymorphism (SNP) markers across a mapping population subsequently used for a genetic mapping study (R/qtl). This approach allowed the identification of 11 stable QTL related to seed quality traits and led to the identification of potential functional genes underlying these traits. Among these, key genes with a known role in carbohydrate metabolic process, cell wall, lignin, and flavonoid biosynthesis, including cellulase , , , and , were found. This study furthers the understanding of the molecular mechanisms underlying seed fibre content and provides new markers for molecular breeding in .

Citing Articles

Identification of SNP markers associated with yield in winter oilseed rape (Brassica napus L.) hybrids.

Bocianowski J, Nowosad K, Kozak B, Martofel J J Appl Genet. 2025; .

PMID: 39985735 DOI: 10.1007/s13353-025-00953-9.


A Comparison of Methods to Estimate Additive-by-Additive-by-Additive of QTL×QTL×QTL Interaction Effects by Monte Carlo Simulation Studies.

Cyplik A, Bocianowski J Int J Mol Sci. 2023; 24(12).

PMID: 37373191 PMC: 10298025. DOI: 10.3390/ijms241210043.


The Flavonoid Biosynthesis and Regulation in : A Review.

Chen Y, Lu H, Jiang K, Wang Y, Wang Y, Jiang J Int J Mol Sci. 2023; 24(1).

PMID: 36613800 PMC: 9820570. DOI: 10.3390/ijms24010357.

References
1.
Bayer P, Ruperao P, Mason A, Stiller J, Chan C, Hayashi S . High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus. Theor Appl Genet. 2015; 128(6):1039-47. DOI: 10.1007/s00122-015-2488-y. View

2.
Pourcel L, Routaboul J, Kerhoas L, Caboche M, Lepiniec L, Debeaujon I . TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. Plant Cell. 2005; 17(11):2966-80. PMC: 1276023. DOI: 10.1105/tpc.105.035154. View

3.
Fu F, Liu L, Chai Y, Chen L, Yang T, Jin M . Localization of QTLs for seed color using recombinant inbred lines of Brassica napus in different environments. Genome. 2007; 50(9):840-54. DOI: 10.1139/g07-068. View

4.
Broman K, Wu H, Sen S, Churchill G . R/qtl: QTL mapping in experimental crosses. Bioinformatics. 2003; 19(7):889-90. DOI: 10.1093/bioinformatics/btg112. View

5.
Song J, Guan Z, Hu J, Guo C, Yang Z, Wang S . Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus. Nat Plants. 2020; 6(1):34-45. PMC: 6965005. DOI: 10.1038/s41477-019-0577-7. View