» Articles » PMID: 34388296

Progress in Soybean Functional Genomics over the Past Decade

Overview
Specialties Biology
Biotechnology
Date 2021 Aug 13
PMID 34388296
Citations 53
Authors
Affiliations
Soon will be listed here.
Abstract

Soybean is one of the most important oilseed and fodder crops. Benefiting from the efforts of soybean breeders and the development of breeding technology, large number of germplasm has been generated over the last 100 years. Nevertheless, soybean breeding needs to be accelerated to meet the needs of a growing world population, to promote sustainable agriculture and to address future environmental changes. The acceleration is highly reliant on the discoveries in gene functional studies. The release of the reference soybean genome in 2010 has significantly facilitated the advance in soybean functional genomics. Here, we review the research progress in soybean omics (genomics, transcriptomics, epigenomics and proteomics), germplasm development (germplasm resources and databases), gene discovery (genes that are responsible for important soybean traits including yield, flowering and maturity, seed quality, stress resistance, nodulation and domestication) and transformation technology during the past decade. At the end, we also briefly discuss current challenges and future directions.

Citing Articles

Ethylene Signaling in Regulating Plant Growth, Development, and Stress Responses.

Wang X, Wen H, Suprun A, Zhu H Plants (Basel). 2025; 14(3).

PMID: 39942870 PMC: 11820588. DOI: 10.3390/plants14030309.


Transcriptome and WGCNA reveals the potential genetic basis of photoperiod-sensitive male sterility in soybean.

Yang Y, He S, Xu L, Wang M, Chen S, Bai Z BMC Genomics. 2025; 26(1):131.

PMID: 39934659 PMC: 11816801. DOI: 10.1186/s12864-025-11314-5.


GmERF13 mediates salt inhibition of nodulation through interacting with GmLBD16a in soybean.

Zhu X, Yan X, Li W, Zhang M, Leng J, Yu Q Nat Commun. 2025; 16(1):435.

PMID: 39762229 PMC: 11704284. DOI: 10.1038/s41467-024-55495-1.


Identification of superior haplotypes and candidate gene for seed size-related traits in soybean ( L.).

Zhang Y, Yang X, Bhat J, Zhang Y, Bu M, Zhao B Mol Breed. 2024; 45(1):3.

PMID: 39717350 PMC: 11663835. DOI: 10.1007/s11032-024-01525-1.


Soybean genomics research community strategic plan: A vision for 2024-2028.

Stupar R, Locke A, Allen D, Stacey M, Ma J, Weiss J Plant Genome. 2024; 17(4):e20516.

PMID: 39572930 PMC: 11628913. DOI: 10.1002/tpg2.20516.


References
1.
Lyu J . Pan-genome upgrade. Nat Plants. 2020; 6(7):732. DOI: 10.1038/s41477-020-0731-2. View

2.
Bishop K, Betzelberger A, Long S, Ainsworth E . Is there potential to adapt soybean (Glycine max Merr.) to future [CO₂]? An analysis of the yield response of 18 genotypes in free-air CO₂ enrichment. Plant Cell Environ. 2014; 38(9):1765-74. DOI: 10.1111/pce.12443. View

3.
Liu Y, Li Q, Lu X, Song Q, Lam S, Zhang W . Soybean GmMYB73 promotes lipid accumulation in transgenic plants. BMC Plant Biol. 2014; 14:73. PMC: 3998039. DOI: 10.1186/1471-2229-14-73. View

4.
Yan Z, Hossain M, Valdes-Lopez O, Hoang N, Zhai J, Wang J . Identification and functional characterization of soybean root hair microRNAs expressed in response to Bradyrhizobium japonicum infection. Plant Biotechnol J. 2015; 14(1):332-41. PMC: 11388829. DOI: 10.1111/pbi.12387. View

5.
Cheng Q, Dong L, Su T, Li T, Gan Z, Nan H . CRISPR/Cas9-mediated targeted mutagenesis of GmLHY genes alters plant height and internode length in soybean. BMC Plant Biol. 2019; 19(1):562. PMC: 6921449. DOI: 10.1186/s12870-019-2145-8. View