» Articles » PMID: 34362879

Integrated Analysis of High-throughput Sequencing Data Reveals the Key Role of LINC00467 in the Invasion and Metastasis of Testicular Germ Cell Tumors

Overview
Date 2021 Aug 7
PMID 34362879
Citations 19
Authors
Affiliations
Soon will be listed here.
Abstract

Long noncoding RNAs (lncRNAs) are involved in various physiological and pathological processes. However, the role of lncRNAs in testicular germ cell tumor (TGCT) has been rarely reported. Our purpose is to comprehensively survey the expression and function of lncRNAs in TGCT. In this study, we used RNA sequencing to construct the lncRNA expression profiles of 13 TGCT tissues and 4 paraneoplastic tissues to explore the function of lncRNAs in TGCT. The bioinformatics analysis showed that many lncRNAs are differentially expressed in TGCT. GO and KEGG enrichment analyses revealed that the differentially expressed lncRNAs participated in various biological processes associated with tumorigenesis in cis and trans manners. Further, we found that the expression of LINC00467 was positively correlated with the poor prognosis and pathological grade of TGCT using WGCNA analysis and GEPIA database data mining. In vitro experiments revealed that LNC00467 could promote the migration and invasion of TGCT cells by regulating the expression of AKT3 and influencing total AKT phosphorylation. Further analysis of TCGA data revealed that the expression was negatively correlated with the infiltration of immune cells and the response to PD1 immunotherapy. In summary, this study is the first to construct the expression profile of lncRNAs in TGCT. It is also the first study to identify the metastasis-promoting role of LNC00467, which can be used as a potential predictor of TGCT prognosis and immunotherapeutic response to provide a clinical reference for the treatment and diagnosis of TGCT metastasis.

Citing Articles

New sights on long non-coding RNAs in glioblastoma: A review of molecular mechanism.

Bagheri-Mohammadi S, Karamivandishi A, Mahdavi S, Siahposht-Khachaki A Heliyon. 2024; 10(21):e39744.

PMID: 39553554 PMC: 11564028. DOI: 10.1016/j.heliyon.2024.e39744.


Biomarker Potential of in Head and Neck Squamous Cell Carcinoma: Correlation with Epithelial-Mesenchymal Transition and Immune Cell Infiltration.

Ju Y, Zhu F, Fang B Int J Med Sci. 2024; 21(5):921-936.

PMID: 38617010 PMC: 11008489. DOI: 10.7150/ijms.93044.


Subgrouping testicular germ cell tumors based on immunotherapy and chemotherapy associated lncRNAs.

Cao J, Liu Z, Yuan J, Luo Y, Wang J, Liu J Heliyon. 2024; 10(2):e24320.

PMID: 38298718 PMC: 10827771. DOI: 10.1016/j.heliyon.2024.e24320.


The Immune Landscape and Immunotherapeutic Strategies in Platinum-Refractory Testicular Germ Cell Tumors.

Evmorfopoulos K, Marsitopoulos K, Karachalios R, Karathanasis A, Dimitropoulos K, Tzortzis V Cancers (Basel). 2024; 16(2).

PMID: 38275869 PMC: 10814346. DOI: 10.3390/cancers16020428.


CSNK1G2-AS1 promotes metastasis, colony formation and serves as a biomarker in testicular germ cell tumor cells.

Li R, Zhou Q, Liu G, Zhu F, Liu Z, Bo H J Cancer. 2023; 14(15):2771-2783.

PMID: 37781070 PMC: 10539554. DOI: 10.7150/jca.85640.


References
1.
Bo H, Gong Z, Zhang W, Li X, Zeng Y, Liao Q . Upregulated long non-coding RNA AFAP1-AS1 expression is associated with progression and poor prognosis of nasopharyngeal carcinoma. Oncotarget. 2015; 6(24):20404-18. PMC: 4653014. DOI: 10.18632/oncotarget.4057. View

2.
Galon J, Costes A, Sanchez-Cabo F, Kirilovsky A, Mlecnik B, Lagorce-Pages C . Type, density, and location of immune cells within human colorectal tumors predict clinical outcome. Science. 2006; 313(5795):1960-4. DOI: 10.1126/science.1129139. View

3.
Yang N, Luo X, Zhang J, Wang G, Guo J . Crosstalk between Meg3 and miR-1297 regulates growth of testicular germ cell tumor through PTEN/PI3K/AKT pathway. Am J Transl Res. 2016; 8(2):1091-9. PMC: 4846952. View

4.
Zhu Y, Li J, Bo H, He D, Xiao M, Xiang L . LINC00467 is up-regulated by TDG-mediated acetylation in non-small cell lung cancer and promotes tumor progression. Oncogene. 2020; 39(38):6071-6084. DOI: 10.1038/s41388-020-01421-w. View

5.
Peng W, Koirala P, Mo Y . LncRNA-mediated regulation of cell signaling in cancer. Oncogene. 2017; 36(41):5661-5667. PMC: 6450570. DOI: 10.1038/onc.2017.184. View