» Articles » PMID: 34346713

Can Testing Predict SARS-CoV-2 Infectivity? The Potential for Certain Methods To Be Surrogates for Replication-Competent Virus

Overview
Specialty Microbiology
Date 2021 Aug 4
PMID 34346713
Citations 44
Authors
Affiliations
Soon will be listed here.
Abstract

Since the beginning of the COVID-19 pandemic, molecular methods (e.g., real-time PCR) have been the primary means of diagnosing the disease. It is now well established that molecular tests can continue to detect SARS-CoV-2 genomic RNA for weeks or months following the resolution of clinical illness. This has prompted public health agencies to recommend a symptom- and/or time-based strategy for discontinuation of isolation precautions, which, for hospitalized patients, results in significant use of personal protective equipment. Due to the inability of current molecular diagnostic assays to differentiate between the presence of remnant viral RNA (i.e., noninfectious) and replication-competent (i.e., infectious) virus, there has been interest in determining whether laboratory tests can be used to predict an individual's likelihood of transmitting the virus to others. This review will highlight what is currently known about the potential for existing assays, such as real-time PCR and antigen tests, to predict active viral infection. In addition, data on the performance of new methods, such as molecular tests targeting viral RNA intermediates (e.g., subgenomic RNA), will be discussed.

Citing Articles

Burden of Acute Respiratory Infections Caused by Influenza Virus, Respiratory Syncytial Virus, and SARS-CoV-2 with Consideration of Older Adults: A Narrative Review.

Hanage W, Schaffner W Infect Dis Ther. 2024; 14(Suppl 1):5-37.

PMID: 39739200 PMC: 11724833. DOI: 10.1007/s40121-024-01080-4.


A cell-based Papain-like Protease (PLpro) activity assay for rapid detection of active SARS-CoV-2 infections and antivirals.

Jimenez-Campos A, Maestas L, Velappan N, Beck B, Ye C, Wernsing K PLoS One. 2024; 19(12):e0309305.

PMID: 39724215 PMC: 11670956. DOI: 10.1371/journal.pone.0309305.


Considerations for Severe Acute Respiratory Syndrome Coronavirus 2 Genomic Surveillance: A Joint Consensus Recommendation of the Association for Molecular Pathology and Association of Public Health Laboratories.

Hirschhorn J, Babady N, Bateman A, Blankenship H, Bard J, Florek K J Mol Diagn. 2024; 27(1):12-24.

PMID: 39442753 PMC: 11702284. DOI: 10.1016/j.jmoldx.2024.09.005.


Detection of COVID-19 incidence among attendees of the 2022 Hajj season.

Alandijany T, Qashqari F, Alfelali M, Hariri S, Hassan A, Faizo A IJID Reg. 2024; 13:100439.

PMID: 39399129 PMC: 11470398. DOI: 10.1016/j.ijregi.2024.100439.


Kinetics of SARS-CoV-2 infection biomarkers in a household transmission study.

Groh A, Vehreschild M, Diaz D, Kuchta A, Dodoo C, Alvarado L Sci Rep. 2024; 14(1):12365.

PMID: 38811590 PMC: 11136983. DOI: 10.1038/s41598-024-62835-0.


References
1.
Wolff G, Limpens R, Zevenhoven-Dobbe J, Laugks U, Zheng S, de Jong A . A molecular pore spans the double membrane of the coronavirus replication organelle. Science. 2020; 369(6509):1395-1398. PMC: 7665310. DOI: 10.1126/science.abd3629. View

2.
Hogan C, Huang C, Sahoo M, Wang H, Jiang B, Sibai M . Strand-Specific Reverse Transcription PCR for Detection of Replicating SARS-CoV-2. Emerg Infect Dis. 2021; 27(2):632-635. PMC: 7853532. DOI: 10.3201/eid2702.204168. View

3.
Moreira L, de Souza Luna L, Barbosa G, Perosa A, Chaves A, Conte D . Test on stool samples improves the diagnosis of hospitalized patients: Detection of SARS-CoV-2 genomic and subgenomic RNA. J Infect. 2020; 82(5):186-230. PMC: 7705339. DOI: 10.1016/j.jinf.2020.11.034. View

4.
Pray I, Ford L, Cole D, Lee C, Bigouette J, Abedi G . Performance of an Antigen-Based Test for Asymptomatic and Symptomatic SARS-CoV-2 Testing at Two University Campuses - Wisconsin, September-October 2020. MMWR Morb Mortal Wkly Rep. 2020; 69(5152):1642-1647. PMC: 9191905. DOI: 10.15585/mmwr.mm695152a3. View

5.
Telwatte S, Martin H, Marczak R, Fozouni P, Vallejo-Gracia A, Kumar G . Novel RT-ddPCR assays for measuring the levels of subgenomic and genomic SARS-CoV-2 transcripts. Methods. 2021; 201:15-25. PMC: 8105137. DOI: 10.1016/j.ymeth.2021.04.011. View