Q-Force: Quantum Mechanically Augmented Molecular Force Fields
Overview
Chemistry
Affiliations
The quality of molecular dynamics simulations strongly depends on the accuracy of the underlying force fields (FFs) that determine all intra- and intermolecular interactions of the system. Commonly, transferable FF parameters are determined based on a representative set of small molecules. However, such an approach sacrifices accuracy in favor of generality. In this work, an open-source and automated toolkit named Q-Force is presented, which augments these transferable FFs with molecule-specific bonded parameters and atomic charges that are derived from quantum mechanical (QM) calculations. The molecular fragmentation procedure allows treatment of large molecules (>200 atoms) with a low computational cost. The generated Q-Force FFs can be used at the same computational cost as transferable FFs, but with improved accuracy: We demonstrate this for the vibrational properties on a set of small molecules and for the potential energy surface on a complex molecule (186 atoms) with photovoltaic applications. Overall, the accuracy, user-friendliness, and minimal computational overhead of the Q-Force protocol make it widely applicable for atomistic molecular dynamics simulations.
Akkerman V, Reinholdt P, Schnoor-Madsen R, Lauritsen L, Bader J, Qian M ACS Chem Neurosci. 2024; 15(23):4322-4336.
PMID: 39574303 PMC: 11892034. DOI: 10.1021/acschemneuro.4c00571.
Lehmann M, Halder S, Reinholdt P, Bashawat M, Scheidt H, Leopold J Anal Chem. 2024; 96(47):18596-18604.
PMID: 39537343 PMC: 11603404. DOI: 10.1021/acs.analchem.3c05720.
Non-negligible Outer-Shell Reorganization Energy for Charge Transfer in Nonpolar Systems.
Yang C, Wang C, Wang Y, Hsu C J Chem Theory Comput. 2024; .
PMID: 39143838 PMC: 11360142. DOI: 10.1021/acs.jctc.4c00742.
Capturing chemical reactions inside biomolecular condensates with reactive Martini simulations.
Brasnett C, Kiani A, Sami S, Otto S, Marrink S Commun Chem. 2024; 7(1):151.
PMID: 38961263 PMC: 11222477. DOI: 10.1038/s42004-024-01234-y.
Simple and Accurate One-Body Energy and Dipole Moment Surfaces for Water and Beyond.
Sami S, LaCour R, Heindel J, Head-Gordon T J Phys Chem Lett. 2024; 15(26):6712-6721.
PMID: 38900596 PMC: 11229074. DOI: 10.1021/acs.jpclett.4c00587.