» Articles » PMID: 34066572

The Expression Characteristics of NPF Genes and Their Response to Vernalization and Nitrogen Deficiency in Rapeseed

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2021 Jun 2
PMID 34066572
Citations 11
Authors
Affiliations
Soon will be listed here.
Abstract

The () genes, initially characterized as nitrate or peptide transporters in plants, are involved in the transport of a large variety of substrates, including amino acids, nitrate, auxin (IAA), jasmonates (JAs), abscisic acid (ABA) and gibberellins (GAs) and glucosinolates. A total of 169 potential functional genes were excavated in , and they showed diversified expression patterns in 90 different organs or tissues based on transcriptome profile data. The complex time-serial expression changes were found for most functional genes in the development process of leaves, silique walls and seeds, which indicated that the expression of () genes may respond to altered phytohormone and secondary metabolite content through combining with promoter element enrichment analysis. Furthermore, many genes were detected to respond to vernalization with two different patterns, and 20 genes responded to nitrate deficiency. These results will provide useful information for further investigation of the biological function of genes for growth and development in rapeseed.

Citing Articles

Quantitative Proteomic Analysis of Brassica Napus Reveals Intersections Between Nutrient Deficiency Responses.

Grubb L, Scandola S, Mehta D, Khodabocus I, Uhrig R Plant Cell Environ. 2024; 48(2):1409-1428.

PMID: 39449274 PMC: 11695800. DOI: 10.1111/pce.15216.


The Role of Chloride Channels in Plant Responses to NaCl.

Liu L, Li X, Wang C, Ni Y, Liu X Int J Mol Sci. 2024; 25(1).

PMID: 38203189 PMC: 10778697. DOI: 10.3390/ijms25010019.


Exploring the genetic landscape of nitrogen uptake in durum wheat: genome-wide characterization and expression profiling of NPF and NRT2 gene families.

Puccio G, Ingraffia R, Giambalvo D, Frenda A, Harkess A, Sunseri F Front Plant Sci. 2023; 14:1302337.

PMID: 38023895 PMC: 10665861. DOI: 10.3389/fpls.2023.1302337.


Genome-Wide Identification of the NRT1 Family Members and Their Expression under Low-Nitrate Conditions in Chinese Cabbage ( L. ssp. ).

Zhang Y, Ritonga F, Zhang S, Wang F, Li J, Gao J Plants (Basel). 2023; 12(22).

PMID: 38005779 PMC: 10675746. DOI: 10.3390/plants12223882.


Integrated approaches for increasing plant yield under salt stress.

Ahmad I, Zhu G, Zhou G, Younas M, Suliman M, Liu J Front Plant Sci. 2023; 14:1215343.

PMID: 37534293 PMC: 10393426. DOI: 10.3389/fpls.2023.1215343.


References
1.
Wen J, Li P, Ran F, Guo P, Zhu J, Yang J . Genome-wide characterization, expression analyses, and functional prediction of the NPF family in Brassica napus. BMC Genomics. 2020; 21(1):871. PMC: 7720588. DOI: 10.1186/s12864-020-07274-7. View

2.
Cui J, Hua Y, Zhou T, Liu Y, Huang J, Yue C . Global Landscapes of the Family Members Uncover their Potential Roles in Regulating the Rapeseed Resistance to Salt Stress. Int J Mol Sci. 2020; 21(10). PMC: 7279160. DOI: 10.3390/ijms21103429. View

3.
Pellizzaro A, Alibert B, Planchet E, Limami A, Morere-Le Paven M . Nitrate transporters: an overview in legumes. Planta. 2017; 246(4):585-595. DOI: 10.1007/s00425-017-2724-6. View

4.
Vega A, OBrien J, Gutierrez R . Nitrate and hormonal signaling crosstalk for plant growth and development. Curr Opin Plant Biol. 2019; 52:155-163. DOI: 10.1016/j.pbi.2019.10.001. View

5.
Tal I, Zhang Y, Jorgensen M, Pisanty O, Barbosa I, Zourelidou M . The Arabidopsis NPF3 protein is a GA transporter. Nat Commun. 2016; 7:11486. PMC: 4857387. DOI: 10.1038/ncomms11486. View