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Construction of a Full-Length CDNA Over-Expressing Library to Identify Valuable Genes from

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2021 Apr 3
PMID 33810585
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Abstract

Poplar wood is the main source of renewable biomass energy worldwide, and is also considered to be a model system for studying woody plants. The Full-length cDNA Over-eXpressing (FOX) gene hunting system is an effective method for generating gain-of-function mutants. Large numbers of novel genes have successfully been identified from many herbaceous plants according to the phenotype of gain-of-function mutants under normal or abiotic stress conditions using this system. However, the system has not been used for functional gene identification with high-throughput mutant screening in woody plants. In this study, we constructed a FOX library from the Chinese white poplar, . The poplar cDNA library was constructed into the plant expression vector pEarleyGate101 and further transformed into (thale cress). We collected 1749 T1 transgenic plants identified by PCR. Of these, 593 single PCR bands from different transgenic lines were randomly selected for sequencing, and 402 diverse sequences of poplar genes were isolated. Most of these genes were involved in photosynthesis, environmental adaptation, and ribosome biogenesis based on Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway annotation. We characterized in detail two mutant lines carrying or cDNA insertions. Phenotypic characterization showed that overexpression of these genes in affected trichome development or secondary cell wall (SCW) deposition, respectively. Together, the -FOX- library generated in our experiments will be helpful for efficient discovery of novel genes in poplar.

References
1.
Zhang J . Overexpression analysis of plant transcription factors. Curr Opin Plant Biol. 2003; 6(5):430-40. DOI: 10.1016/s1369-5266(03)00081-5. View

2.
Jansson S, Douglas C . Populus: a model system for plant biology. Annu Rev Plant Biol. 2007; 58:435-58. DOI: 10.1146/annurev.arplant.58.032806.103956. View

3.
Ricachenevsky F, Punshon T, Lee S, Oliveira B, Trenz T, Maraschin F . Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7. Front Plant Sci. 2018; 9:865. PMC: 6037872. DOI: 10.3389/fpls.2018.00865. View

4.
Johnson C, Kolevski B, Smyth D . TRANSPARENT TESTA GLABRA2, a trichome and seed coat development gene of Arabidopsis, encodes a WRKY transcription factor. Plant Cell. 2002; 14(6):1359-75. PMC: 150785. DOI: 10.1105/tpc.001404. View

5.
Yordanov Y, Ma C, Strauss S, Busov V . EARLY BUD-BREAK 1 (EBB1) is a regulator of release from seasonal dormancy in poplar trees. Proc Natl Acad Sci U S A. 2014; 111(27):10001-6. PMC: 4103365. DOI: 10.1073/pnas.1405621111. View