» Articles » PMID: 33757896

Nitroxide Spin Labels and EPR Spectroscopy: A Powerful Association for Protein Dynamics Studies

Overview
Publisher Elsevier
Date 2021 Mar 24
PMID 33757896
Citations 30
Authors
Affiliations
Soon will be listed here.
Abstract

Site-Directed Spin Labelling (SDSL) technique is based on the attachment of a paramagnetic label onto a specific position of a protein (or other bio-molecules) and the subsequent study by Electron Paramagnetic Resonance (EPR) spectroscopy. In particular, continuous-wave EPR (cw-EPR) spectra can detect the local conformational dynamics for proteins under various conditions. Moreover, pulse-EPR experiments on doubly spin-labelled proteins allow measuring distances between spin centres in the 1.5-8 nm range, providing information about structures and functions. This review focuses on SDSL-EPR spectroscopy as a structural biology tool to investigate proteins using nitroxide labels. The versatility of this spectroscopic approach for protein structural characterization has been demonstrated through the choice of recent studies. The main aim is to provide a general overview of the technique, particularly for non-experts, to spread the applicability of this technique in various fields of structural biology.

Citing Articles

RIDME Spectroscopy: New Topics Beyond the Determination of Electron Spin-Spin Distances.

Kuzin S, Yulikov M J Phys Chem Lett. 2025; 16(4):1024-1037.

PMID: 39841411 PMC: 11789150. DOI: 10.1021/acs.jpclett.4c02667.


A pressure-jump EPR system to monitor millisecond conformational exchange rates of spin-labeled proteins.

Grosskopf J, Sidabras J, Altenbach C, Anderson J, Mett R, Strangeway R Protein Sci. 2024; 33(12):e5220.

PMID: 39565088 PMC: 11577460. DOI: 10.1002/pro.5220.


Exploring protein structural ensembles: Integration of sparse experimental data from electron paramagnetic resonance spectroscopy with molecular modeling methods.

Belyaeva J, Elgeti M Elife. 2024; 13.

PMID: 39283059 PMC: 11405019. DOI: 10.7554/eLife.99770.


Interfacial dynamics mediate surface binding events on supramolecular nanostructures.

Christoff-Tempesta T, Cho Y, Kaser S, Uliassi L, Zuo X, Hilburg S Nat Commun. 2024; 15(1):7749.

PMID: 39237531 PMC: 11377763. DOI: 10.1038/s41467-024-51494-4.


Pulsed Dipolar EPR for Self-Limited Complexes of Oligonucleotides Studies.

Chubarov A, Endeward B, Kanarskaya M, Polienko Y, Prisner T, Lomzov A Biomolecules. 2024; 14(8).

PMID: 39199275 PMC: 11351890. DOI: 10.3390/biom14080887.