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Next-generation Sequencing of the Whole Mitochondrial Genome Identifies Novel and Common Variants in Patients with Psoriasis, Type 2 Diabetes Mellitus and Psoriasis with Comorbid Type 2 Diabetes Mellitus

Overview
Journal Biomed Rep
Specialty Biochemistry
Date 2021 Mar 17
PMID 33728047
Citations 3
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Abstract

Recent studies have shown the role of mitochondrial DNA (mtDNA) variants in the pathogenesis of both psoriasis (Ps) and type 2 diabetes (T2D) amongst different ethnicities. However, no studies have investigated the mtDNA variants present in patients with Ps, T2D, and both Ps and T2D (Ps-T2D) in the Arab population. The entire mitochondrial genomes of Kuwaiti subjects with Ps, T2D, Ps-T2D and healthy controls were sequenced using Ion Torrent next-generation sequencing. A total of 36 novel mutations and 51 previously reported mutations were identified in the patient groups that were absent in the controls. Amongst the novel mutations, eight were non-synonymous and exhibited amino acid changes. Of these, two missense mutations (G5262A and A12397G) in the genes were detected in the Ps group and a C15735T missense mutation in the gene was detected in Ps-T2D. Other known sequence variations were seen more frequently in all or certain patient groups compared with the controls (P<0.05). Additionally, the A8701G missense mutation in the gene missense mutation was also observed in a higher frequency in the Ps group compared with the control. The present study is the first to perform a complete mitochondrial genome sequence analysis of Kuwaiti subjects with Ps, T2D and Ps-T2D, and both novel and known mtDNA variants were discovered. The patient-specific novel non-synonymous mutations may be co-responsible in the determination of these diseases. The higher frequency of certain mtDNA variants in the patients compared with the controls may suggest a role in predisposing patients to these diseases. Further functional analyses are required to reveal the role of the identified mutations in these disease conditions.

Citing Articles

mtDNA Single-Nucleotide Variants Associated with Type 2 Diabetes.

Garcia-Gaona E, Garcia-Gregorio A, Garcia-Jimenez C, Lopez-Olaiz M, Mendoza-Ramirez P, Fernandez-Guzman D Curr Issues Mol Biol. 2023; 45(11):8716-8732.

PMID: 37998725 PMC: 10670651. DOI: 10.3390/cimb45110548.


Comprehensive analysis of mitochondrial DNA variants, mitochondrial DNA copy number and oxidative damage in psoriatic arthritis.

Alwehaidah M, Alsabbagh M, Al-Kafaji G Biomed Rep. 2023; 19(5):85.

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Leukocyte mitochondrial DNA copy number is a potential non-invasive biomarker for psoriasis.

Alwehaidah M, AlFadhli S, Al-Kafaji G PLoS One. 2022; 17(6):e0270714.

PMID: 35767552 PMC: 9242485. DOI: 10.1371/journal.pone.0270714.

References
1.
Hahn A, Zuryn S . Mitochondrial Genome (mtDNA) Mutations that Generate Reactive Oxygen Species. Antioxidants (Basel). 2019; 8(9). PMC: 6769445. DOI: 10.3390/antiox8090392. View

2.
Negishi Y, Hattori A, Takeshita E, Sakai C, Ando N, Ito T . Homoplasmy of a mitochondrial 3697G>A mutation causes Leigh syndrome. J Hum Genet. 2014; 59(7):405-7. DOI: 10.1038/jhg.2014.41. View

3.
Schwandt A, Bergis D, Dapp A, Ebner S, Jehle P, Koppen S . Psoriasis and Diabetes: A Multicenter Study in 222078 Type 2 Diabetes Patients Reveals High Levels of Depression. J Diabetes Res. 2015; 2015:792968. PMC: 4556326. DOI: 10.1155/2015/792968. View

4.
Santos J, Hunakova L, Chen Y, Bortner C, Van Houten B . Cell sorting experiments link persistent mitochondrial DNA damage with loss of mitochondrial membrane potential and apoptotic cell death. J Biol Chem. 2002; 278(3):1728-34. DOI: 10.1074/jbc.M208752200. View

5.
Taanman J . The mitochondrial genome: structure, transcription, translation and replication. Biochim Biophys Acta. 1999; 1410(2):103-23. DOI: 10.1016/s0005-2728(98)00161-3. View