» Articles » PMID: 33670881

Primitive Compartmentalization for the Sustainable Replication of Genetic Molecules

Overview
Journal Life (Basel)
Specialty Biology
Date 2021 Mar 6
PMID 33670881
Citations 13
Authors
Affiliations
Soon will be listed here.
Abstract

Sustainable replication and evolution of genetic molecules such as RNA are likely requisites for the emergence of life; however, these processes are easily affected by the appearance of parasitic molecules that replicate by relying on the function of other molecules, while not contributing to their replication. A possible mechanism to repress parasite amplification is compartmentalization that segregates parasitic molecules and limits their access to functional genetic molecules. Although extent cells encapsulate genomes within lipid-based membranes, more primitive materials or simple geological processes could have provided compartmentalization on early Earth. In this review, we summarize the current understanding of the types and roles of primitive compartmentalization regarding sustainable replication of genetic molecules, especially from the perspective of the prevention of parasite replication. In addition, we also describe the ability of several environments to selectively accumulate longer genetic molecules, which could also have helped select functional genetic molecules rather than fast-replicating short parasitic molecules.

Citing Articles

RNA World with Inhibitors.

Synak J, Rybarczyk A, Kasprzak M, Blazewicz J Entropy (Basel). 2025; 26(12.

PMID: 39766641 PMC: 11726725. DOI: 10.3390/e26121012.


Evidence of Heritability in Prebiotically Realistic Membrane-Bound Systems.

Sokolskyi T, Ganju P, Montgomery-Taylor R, Baum D Life (Basel). 2024; 14(3).

PMID: 38541610 PMC: 10971454. DOI: 10.3390/life14030284.


Constraint on an RNA world on montmorillonite clay.

Mizuuchi R Biophys J. 2024; 123(4):421-423.

PMID: 38263691 PMC: 10912893. DOI: 10.1016/j.bpj.2024.01.020.


RNA folding studies inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life.

Meyer M, Yamagami R, Choi S, Keating C, Bevilacqua P Sci Adv. 2023; 9(38):eadh5152.

PMID: 37729412 PMC: 10511188. DOI: 10.1126/sciadv.adh5152.


Emergence of linkage between cooperative RNA replicators encoding replication and metabolic enzymes through experimental evolution.

Ueda K, Mizuuchi R, Ichihashi N PLoS Genet. 2023; 19(8):e1010471.

PMID: 37540715 PMC: 10431678. DOI: 10.1371/journal.pgen.1010471.


References
1.
Sahai N, Kaddour H, Dalai P, Wang Z, Bass G, Gao M . Mineral Surface Chemistry and Nanoparticle-aggregation Control Membrane Self-Assembly. Sci Rep. 2017; 7:43418. PMC: 5339912. DOI: 10.1038/srep43418. View

2.
Monnard P, Kanavarioti A, Deamer D . Eutectic phase polymerization of activated ribonucleotide mixtures yields quasi-equimolar incorporation of purine and pyrimidine nucleobases. J Am Chem Soc. 2003; 125(45):13734-40. DOI: 10.1021/ja036465h. View

3.
Mizuuchi R, Ichihashi N . Sustainable replication and coevolution of cooperative RNAs in an artificial cell-like system. Nat Ecol Evol. 2018; 2(10):1654-1660. DOI: 10.1038/s41559-018-0650-z. View

4.
Biondi E, Branciamore S, Maurel M, Gallori E . Montmorillonite protection of an UV-irradiated hairpin ribozyme: evolution of the RNA world in a mineral environment. BMC Evol Biol. 2007; 7 Suppl 2:S2. PMC: 1963481. DOI: 10.1186/1471-2148-7-S2-S2. View

5.
Eickbush T, Moudrianakis E . A mechanism for the entrapment of DNA at an air-water interface. Biophys J. 1977; 18(3):275-88. PMC: 1473303. DOI: 10.1016/S0006-3495(77)85613-0. View