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Bringing MicroRNAs to Light: Methods for MicroRNA Quantification and Visualization in Live Cells

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Date 2021 Feb 4
PMID 33537295
Citations 32
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Abstract

MiRNAs are small non-coding RNAs that interact with their target mRNAs for posttranscriptional gene regulation. Finely controlled miRNA biogenesis, target recognition and degradation indicate that maintaining miRNA homeostasis is essential for regulating cell proliferation, growth, differentiation and apoptosis. Increasingly, miRNAs have been recognized as a potential biomarker for disease diagnosis. MiRNAs can be found in blood, plasma, and tissues, and miRNA expression and activity differ in developmental stages, tissues and in response to external stimuli. MiRNA transcripts are matured from pri-miRNA over pre-miRNA to mature miRNA, a process that includes multiple steps and enzymes. Many tools are available to identify and quantify specific miRNAs, ranging from measuring total miRNA, specific miRNA activity, miRNA arrays and miRNA localization. The various miRNA assays differ in accuracy, cost, efficiency and convenience of monitoring miRNA dynamics. To acknowledge the significance and increasing research interest in miRNAs, we summarize the traditional as well as novel methods of miRNA quantification with strengths and limitations of various techniques in biochemical and medical research.

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References
1.
Varallyay E, Burgyan J, Havelda Z . MicroRNA detection by northern blotting using locked nucleic acid probes. Nat Protoc. 2008; 3(2):190-6. DOI: 10.1038/nprot.2007.528. View

2.
Fendler W, Malachowska B, Meghani K, Konstantinopoulos P, Guha C, Singh V . Evolutionarily conserved serum microRNAs predict radiation-induced fatality in nonhuman primates. Sci Transl Med. 2017; 9(379). PMC: 5441546. DOI: 10.1126/scitranslmed.aal2408. View

3.
Niu Y, Zhang L, Qiu H, Wu Y, Wang Z, Zai Y . An improved method for detecting circulating microRNAs with S-Poly(T) Plus real-time PCR. Sci Rep. 2015; 5:15100. PMC: 4602224. DOI: 10.1038/srep15100. View

4.
Bustin S . Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. J Mol Endocrinol. 2000; 25(2):169-93. DOI: 10.1677/jme.0.0250169. View

5.
Jin Y, Chen Z, Liu X, Zhou X . Evaluating the microRNA targeting sites by luciferase reporter gene assay. Methods Mol Biol. 2012; 936:117-27. PMC: 3646406. DOI: 10.1007/978-1-62703-083-0_10. View