» Articles » PMID: 33414985

New Insights of Extrachromosomal DNA in Tumorigenesis and Therapeutic Resistance of Cancer

Overview
Journal Am J Cancer Res
Specialty Oncology
Date 2021 Jan 8
PMID 33414985
Citations 6
Authors
Affiliations
Soon will be listed here.
Abstract

In the past few decades, the studies of extrachromosomal DNA (ecDNA), which existed independently of chromosomes, were tepid. However, recent studies on ecDNA rekindled the enthusiasm of oncologists for further studying ecDNA. In this review, we summarized the recent advances of ecDNA in oncogenesis and oncotherapy. ecDNA consists of highly open chromatin, and its circular structure enables ultra-long-range chromatin contacts. ecDNA is not inherited in accordance with Mendel's laws. Furthermore, ecDNA is widely existed in cancer cells, but almost never found in normal cells. It has been found that ecDNA played important roles in tumorigenesis and tumor progression, including oncogene amplification, tumor heterogeneity, enhancer hijacking and genomic rearrangement. More importantly, ecDNA is closely related to cancer treatment resistance. In hence, further understanding of ecDNA would contribute to developing innovative targeting ecDNA therapies.

Citing Articles

Repression of the SUMO-conjugating enzyme UBC9 is associated with lowered double minutes and reduced tumor progression.

Wang Y, Zou H, Ji W, Huang M, You B, Sun N Cancer Biol Ther. 2024; 25(1):2323768.

PMID: 38465861 PMC: 10936631. DOI: 10.1080/15384047.2024.2323768.


Dynamics of Amino Acid Metabolism, Gene Expression, and Circulomics in a Recombinant Chinese Hamster Ovary Cell Line Adapted to Moderate and High Levels of Extracellular Lactate.

Chitwood D, Uy L, Fu W, Klaubert S, Harcum S, Saski C Genes (Basel). 2023; 14(8).

PMID: 37628627 PMC: 10454118. DOI: 10.3390/genes14081576.


Microevolutionary dynamics of eccDNA in Chinese hamster ovary cells grown in fed-batch cultures under control and lactate-stressed conditions.

Chitwood D, Wang Q, Klaubert S, Green K, Wu C, Harcum S Sci Rep. 2023; 13(1):1200.

PMID: 36681715 PMC: 9862248. DOI: 10.1038/s41598-023-27962-0.


3D chromatin architecture and transcription regulation in cancer.

Deng S, Feng Y, Pauklin S J Hematol Oncol. 2022; 15(1):49.

PMID: 35509102 PMC: 9069733. DOI: 10.1186/s13045-022-01271-x.


Extrachromosomal Circular DNA: Category, Biogenesis, Recognition, and Functions.

Cao X, Wang S, Ge L, Zhang W, Huang J, Sun W Front Vet Sci. 2021; 8:693641.

PMID: 34568472 PMC: 8458813. DOI: 10.3389/fvets.2021.693641.


References
1.
Vogt N, Gibaud A, Lemoine F, De La Grange P, Debatisse M, Malfoy B . Amplicon rearrangements during the extrachromosomal and intrachromosomal amplification process in a glioma. Nucleic Acids Res. 2014; 42(21):13194-205. PMC: 4245956. DOI: 10.1093/nar/gku1101. View

2.
Xu K, Ding L, Chang T, Shao Y, Chiang J, Mulder H . Structure and evolution of double minutes in diagnosis and relapse brain tumors. Acta Neuropathol. 2018; 137(1):123-137. PMC: 6338707. DOI: 10.1007/s00401-018-1912-1. View

3.
Alvarez-Calderon F, Gregory M, DeGregori J . Using functional genomics to overcome therapeutic resistance in hematological malignancies. Immunol Res. 2012; 55(1-3):100-15. PMC: 3673782. DOI: 10.1007/s12026-012-8353-z. View

4.
Khoo B, Chaudhuri P, Ramalingam N, Tan D, Lim C, Warkiani M . Single-cell profiling approaches to probing tumor heterogeneity. Int J Cancer. 2016; 139(2):243-55. DOI: 10.1002/ijc.30006. View

5.
Zou H, Feng R, Huang Y, Tripodi J, Najfeld V, Tsankova N . Double minute amplification of mutant PDGF receptor α in a mouse glioma model. Sci Rep. 2015; 5:8468. PMC: 4329559. DOI: 10.1038/srep08468. View