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The Complete Mitochondrial Genome of a Tropical Sea Cucumber,

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Date 2020 Dec 28
PMID 33365879
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Abstract

The mitochondrial genome of was 15,906 bp in length, containing 13 protein-coding genes (PCGs), 22 tRNA genes, and two rRNA genes. There were four initiation codons (ATG, ATT, ATC, and ATA) for the PCGs, and the termination codon of most PCGs was TAA, except for (TAG) and (TAG). Only one PCG () and five tRNA genes ( , , , , and ) were encoded on the light chain; the other genes were encoded on the heavy chain. was most closely related to in a phylogenetic tree.

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References
1.
Lowe T, Eddy S . tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 1997; 25(5):955-64. PMC: 146525. DOI: 10.1093/nar/25.5.955. View

2.
Fan S, Hu C, Wen J, Zhang L . Characterization of mitochondrial genome of sea cucumber Stichopus horrens: a novel gene arrangement in Holothuroidea. Sci China Life Sci. 2011; 54(5):434-41. DOI: 10.1007/s11427-011-4168-8. View

3.
Boore J . Animal mitochondrial genomes. Nucleic Acids Res. 1999; 27(8):1767-80. PMC: 148383. DOI: 10.1093/nar/27.8.1767. View

4.
Shadel G, Clayton D . Mitochondrial DNA maintenance in vertebrates. Annu Rev Biochem. 1997; 66:409-35. DOI: 10.1146/annurev.biochem.66.1.409. View

5.
WOLSTENHOLME D . Animal mitochondrial DNA: structure and evolution. Int Rev Cytol. 1992; 141:173-216. DOI: 10.1016/s0074-7696(08)62066-5. View