EMPRess: a Systematic Cophylogeny Reconciliation Tool

Overview

Journal Bioinformatics

Publisher Oxford University Press

Specialty Biology

Date 2020 Nov 20

PMID 33216126

Citations 26

Authors

Santi Santichaivekin

Qing Yang

Jingyi Liu

Ross Mawhorter

Justin Jiang

Trenton Wesley

Yi-Chieh Wu

Ran Libeskind-Hadas

Affiliations

Soon will be listed here.

Abstract

Summary: We describe eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.

Availability And Implementation: eMPRess is freely available at http://www.cs.hmc.edu/empress.

Supplementary Information: Supplementary data are available at Bioinformatics online.

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