Circulating MiR-1246 in the Progression of Chronic Obstructive Pulmonary Disease (COPD) in Patients from the BODE Cohort
Overview
Authors
Affiliations
Background: COPD is characterized by a persistent inflammatory response, especially against cigarette smoke. COPD patients may develop varying degrees of emphysematous destruction of the lungs. A pathophysiological role for miRNAs in COPD has been suggested in several studies. We examined changes in microRNAs expression profile during 10 years follow-up in relation to COPD progression.
Methods: Clinical and lung function parameters were registered from every subject included in the study. miRNAs expression was determined in 14 serum samples from 7 patients in two moments (4 smokers with COPD (BODE cohort) and 3 smokers without COPD) by next generation sequencing (NGS) at baseline and after 10 years follow-up. A validation study was performed by qPCR in 20 patients with COPD (13 emphysema-diagnosed by CTscan) and 10 smoker controls at baseline and after 10 years follow-up. hsa-miRNA-20a-5p and hsa-let-7d-5p were used as endogenous controls.
Results: A total of 198 miRNAs (≥10TPM) were identified by NGS. Between these, hsa-miR-1246 was found significantly downregulated in COPD patients after 10 years when compared to baseline (p<0.0001, FDR=0.05). Seventy-five percent of these patients had an emphysema diagnose. In the validation analysis, when analyzed longitudinally, hsa-miR-1246 was significantly downregulated in COPD patients with emphysema after 10 years (p= 0.019). However, no association was found between the expression of miR-1246 and any other lung function parameters (FEV, PaO, DL, IC/TLC) within the follow-up period. GO and KEGG enrichment analysis revealed miR-1246 to be associated with target genes in several pathways involved in COPD/emphysema development.
Conclusion: Our findings suggest that hsa-miR-1246 may act as a biomarker of emphysema in COPD. Functional analysis is guaranteed to elucidate its role in COPD.
Gao L, Kyubwa E, Starbird M, Diaz de Leon J, Nguyen M, Rogers C Sci Rep. 2023; 13(1):21656.
PMID: 38065980 PMC: 10709343. DOI: 10.1038/s41598-023-48227-w.
Altered microRNA Transcriptome in Cultured Human Airway Cells upon Infection with SARS-CoV-2.
Diallo I, Jacob R, Vion E, Kozak R, Mossman K, Provost P Viruses. 2023; 15(2).
PMID: 36851710 PMC: 9962802. DOI: 10.3390/v15020496.
Serum microRNAs targeting and genes distinguish asymptomatic from critical COVID-19 patients.
Calderon-Dominguez M, Trejo-Gutierrez E, Gonzalez-Rovira A, Beltran-Camacho L, Rojas-Torres M, Eslava-Alcon S Mol Ther Nucleic Acids. 2022; 29:76-87.
PMID: 35721225 PMC: 9188110. DOI: 10.1016/j.omtn.2022.06.006.
Fang Y, Yan D, Wang L, Zhang J, He Q J Clin Lab Anal. 2022; 36(7):e24541.
PMID: 35666610 PMC: 9279946. DOI: 10.1002/jcla.24541.
Kucher A, Koroleva I, Zarubin A, Nazarenko M Mol Biol. 2022; 56(1):29-45.
PMID: 35464324 PMC: 9016216. DOI: 10.1134/S0026893322010034.