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Draft Genome Sequence of Escherichia Coli Strain Tj, Isolated from the Varzob River in Tajikistan

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Specialty Microbiology
Date 2020 Oct 9
PMID 33033128
Citations 1
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Abstract

The 4.6-Mbp draft genome sequence of strain Tj, isolated from the Varzob River in Tajikistan, is presented. This strain possesses four prophage elements related to phage SfV, O157:H7-specific phage ϕV10, lambdoid phage HK225, and coliphage Ayreon. It contains a gene encoding a hemolysin E toxin.

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Draft Genome Sequence of Agrobacterium radiobacter Strain MD22b, Isolated from a Grape Plant in Tajikistan.

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PMID: 36939329 PMC: 10112236. DOI: 10.1128/mra.01131-22.

References
1.
Meier-Kolthoff J, Goker M . TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat Commun. 2019; 10(1):2182. PMC: 6522516. DOI: 10.1038/s41467-019-10210-3. View

2.
Couvin D, Bernheim A, Toffano-Nioche C, Touchon M, Michalik J, Neron B . CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins. Nucleic Acids Res. 2018; 46(W1):W246-W251. PMC: 6030898. DOI: 10.1093/nar/gky425. View

3.
Shurigin V, Hakobyan A, Panosyan H, Egamberdieva D, Davranov K, Birkeland N . A glimpse of the prokaryotic diversity of the Large Aral Sea reveals novel extremophilic bacterial and archaeal groups. Microbiologyopen. 2019; 8(9):e00850. PMC: 6741134. DOI: 10.1002/mbo3.850. View

4.
Perry L, SanMiguel P, Minocha U, Terekhov A, Shroyer M, Farris L . Sequence analysis of Escherichia coli O157:H7 bacteriophage PhiV10 and identification of a phage-encoded immunity protein that modifies the O157 antigen. FEMS Microbiol Lett. 2009; 292(2):182-6. DOI: 10.1111/j.1574-6968.2009.01511.x. View

5.
Vlot M, Nobrega F, Wong C, Liu Y, Brouns S . Complete Genome Sequence of the Phage Ayreon. Genome Announc. 2018; 6(2). PMC: 5764929. DOI: 10.1128/genomeA.01354-17. View