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1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors Against Cephalosporinase

Abstract

Boronic acid transition state inhibitors (BATSIs) are known reversible covalent inhibitors of serine β-lactamases. The selectivity and high potency of specific BATSIs bearing an amide side chain mimicking the β-lactam's amide side chain are an established and recognized synthetic strategy. Herein, we describe a new class of BATSIs where the amide group is replaced by a bioisostere triazole; these compounds were designed as molecular probes. To this end, a library of 26 α-triazolylmethaneboronic acids was synthesized and tested against the clinically concerning -derived cephalosporinase, ADC-7. In steady state analyses, these compounds demonstrated values ranging from 90 nM to 38 μM (±10%). Five compounds were crystallized in complex with ADC-7 β-lactamase, and all the crystal structures reveal the triazole is in the putative amide binding site, thus confirming the triazole-amide bioisosterism. The easy synthetic access of these new inhibitors as prototype scaffolds allows the insertion of a wide range of chemical groups able to explore the enzyme binding site and provides insights on the importance of specific residues in recognition and catalysis. The best inhibitor identified, compound ( 90 nM), places a tolyl group near Arg340, making favorable cation-π interactions. Notably, the structure of does not resemble the natural substrate of the β-lactamase yet displays a pronounced inhibition activity, in addition to lowering the minimum inhibitory concentration (MIC) of ceftazidime against three bacterial strains expressing class C β-lactamases. In summary, these observations validate the α-triazolylboronic acids as a promising template for further inhibitor design.

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References
1.
Drawz S, Babic M, Bethel C, Taracila M, Distler A, Ori C . Inhibition of the class C beta-lactamase from Acinetobacter spp.: insights into effective inhibitor design. Biochemistry. 2009; 49(2):329-40. PMC: 2810401. DOI: 10.1021/bi9015988. View

2.
Griffith D, Sabet M, Tarazi Z, Lomovskaya O, Dudley M . Pharmacokinetics/Pharmacodynamics of Vaborbactam, a Novel Beta-Lactamase Inhibitor, in Combination with Meropenem. Antimicrob Agents Chemother. 2018; 63(1). PMC: 6325214. DOI: 10.1128/AAC.01659-18. View

3.
Caselli E, Romagnoli C, Vahabi R, Taracila M, Bonomo R, Prati F . Click Chemistry in Lead Optimization of Boronic Acids as β-Lactamase Inhibitors. J Med Chem. 2015; 58(14):5445-58. PMC: 5744665. DOI: 10.1021/acs.jmedchem.5b00341. View

4.
Crompton I, Cuthbert B, Lowe G, WALEY S . Beta-lactamase inhibitors. The inhibition of serine beta-lactamases by specific boronic acids. Biochem J. 1988; 251(2):453-9. PMC: 1149024. DOI: 10.1042/bj2510453. View

5.
Bonandi E, Christodoulou M, Fumagalli G, Perdicchia D, Rastelli G, Passarella D . The 1,2,3-triazole ring as a bioisostere in medicinal chemistry. Drug Discov Today. 2017; 22(10):1572-1581. DOI: 10.1016/j.drudis.2017.05.014. View