» Articles » PMID: 32245207

Quantitative Trait Loci (QTLs) Associated with Microspore Culture in L. (Radish)

Overview
Journal Genes (Basel)
Publisher MDPI
Date 2020 Apr 5
PMID 32245207
Citations 2
Authors
Affiliations
Soon will be listed here.
Abstract

The radish is a highly self-incompatible plant, and consequently it is difficult to produce homozygous lines. Bud pollination in cross-fertilization plants should be done by opening immature pollen and attaching pollen to mature flowers. It accordingly takes a lot of time and effort to develop lines with fixed alleles. In the current study, a haploid breeding method has been applied to obtain homozygous plants in a short period of time by doubling chromosomes through the induction of a plant body in the haploid cells, in order to shorten the time to breed inbred lines. We constructed genetic maps with an F1 population derived by crossing parents that show a superior and inferior ability to regenerate microspores, respectively. Genetic maps were constructed from the maternal and parental maps, separately, using the two-way pseudo-testcross model. The phenotype of the regeneration rate was examined by microspore cultures and a quantitative trait loci (QTL) analysis was performed based on the regeneration rate. From the results of the culture of microspores in the F1 population, more than half of the group did not regenerate, and only a few showed a high regeneration rate. A total of five significant QTLs were detected in the F1 population, and five candidate genes were found based on the results. These candidate genes are divided into two classes, and appear to be related to either PRC2 subunits or auxin synthesis.

Citing Articles

Molecular basis of heterosis and related breeding strategies reveal its importance in vegetable breeding.

Yu D, Gu X, Zhang S, Dong S, Miao H, Gebretsadik K Hortic Res. 2021; 8(1):120.

PMID: 34059656 PMC: 8166827. DOI: 10.1038/s41438-021-00552-9.


Natural Variation in Plant Pluripotency and Regeneration.

Lardon R, Geelen D Plants (Basel). 2020; 9(10).

PMID: 32987766 PMC: 7598583. DOI: 10.3390/plants9101261.

References
1.
Sakamoto K, Kusaba M, Nishio T . Single-seed PCR-RFLP analysis for the identification of S haplotypes in commercial F hybrid cultivars of broccoli and cabbage. Plant Cell Rep. 2019; 19(4):400-406. DOI: 10.1007/s002990050747. View

2.
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A . The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 2010; 20(9):1297-303. PMC: 2928508. DOI: 10.1101/gr.107524.110. View

3.
Ikeuchi M, Favero D, Sakamoto Y, Iwase A, Coleman D, Rymen B . Molecular Mechanisms of Plant Regeneration. Annu Rev Plant Biol. 2019; 70:377-406. DOI: 10.1146/annurev-arplant-050718-100434. View

4.
Moghe G, Hufnagel D, Tang H, Xiao Y, Dworkin I, Town C . Consequences of Whole-Genome Triplication as Revealed by Comparative Genomic Analyses of the Wild Radish Raphanus raphanistrum and Three Other Brassicaceae Species. Plant Cell. 2014; 26(5):1925-1937. PMC: 4079359. DOI: 10.1105/tpc.114.124297. View

5.
Liu J, Sheng L, Xu Y, Li J, Yang Z, Huang H . WOX11 and 12 are involved in the first-step cell fate transition during de novo root organogenesis in Arabidopsis. Plant Cell. 2014; 26(3):1081-93. PMC: 4001370. DOI: 10.1105/tpc.114.122887. View