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Exploiting B Cell Receptor Analyses to Inform on HIV-1 Vaccination Strategies

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Date 2020 Jan 8
PMID 31906351
Citations 15
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Abstract

The human antibody repertoire is generated by the recombination of different gene segments as well as by processes of somatic mutation. Together these mechanisms result in a tremendous diversity of antibodies that are able to combat various pathogens including viruses and bacteria, or malignant cells. In this review, we summarize the opportunities and challenges that are associated with the analyses of the B cell receptor repertoire and the antigen-specific B cell response. We will discuss how recent advances have increased our understanding of the antibody response and how repertoire analyses can be exploited to inform on vaccine strategies, particularly against HIV-1.

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References
1.
MacLeod D, Choi N, Briney B, Garces F, Ver L, Landais E . Early Antibody Lineage Diversification and Independent Limb Maturation Lead to Broad HIV-1 Neutralization Targeting the Env High-Mannose Patch. Immunity. 2016; 44(5):1215-26. PMC: 5003182. DOI: 10.1016/j.immuni.2016.04.016. View

2.
Jackson K, Liu Y, Roskin K, Glanville J, Hoh R, Seo K . Human responses to influenza vaccination show seroconversion signatures and convergent antibody rearrangements. Cell Host Microbe. 2014; 16(1):105-14. PMC: 4158033. DOI: 10.1016/j.chom.2014.05.013. View

3.
Briney B, Willis J, Crowe Jr J . Human peripheral blood antibodies with long HCDR3s are established primarily at original recombination using a limited subset of germline genes. PLoS One. 2012; 7(5):e36750. PMC: 3348910. DOI: 10.1371/journal.pone.0036750. View

4.
Havenar-Daughton C, Abbott R, Schief W, Crotty S . When designing vaccines, consider the starting material: the human B cell repertoire. Curr Opin Immunol. 2018; 53:209-216. PMC: 6148213. DOI: 10.1016/j.coi.2018.08.002. View

5.
Woda M, Mathew A . Fluorescently labeled dengue viruses as probes to identify antigen-specific memory B cells by multiparametric flow cytometry. J Immunol Methods. 2014; 416:167-77. PMC: 4440233. DOI: 10.1016/j.jim.2014.12.001. View