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Enhanced Characterization of Membrane Protein Complexes by Ultraviolet Photodissociation Mass Spectrometry

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Journal Anal Chem
Specialty Chemistry
Date 2019 Nov 26
PMID 31765130
Citations 25
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Abstract

Development of chemical chaperones to solubilize membrane protein complexes in aqueous solutions has allowed for gas-phase analysis of their native-like assemblies, including rapid evaluation of stability and interacting partners. Characterization of protein primary sequence, however, has thus far been limited. Ultraviolet photodissociation (UVPD) generates a multitude of sequence ions for the ammonia channel (AmtB), provides improved localization of a possible post-translational modification of aquaporin Z (AqpZ), and surpasses previous reports of sequence coverage for mechanosensitive channel of large conductance (MscL). Variations in UVPD sequence ion abundance have been shown to correspond to structural changes induced upon some perturbation. Preliminary results are reported here for elucidating increased rigidity or flexibility of MscL when bound to various phospholipids.

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References
1.
Reading E, Walton T, Liko I, Marty M, Laganowsky A, Rees D . The Effect of Detergent, Temperature, and Lipid on the Oligomeric State of MscL Constructs: Insights from Mass Spectrometry. Chem Biol. 2015; 22(5):593-603. PMC: 6585436. DOI: 10.1016/j.chembiol.2015.04.016. View

2.
Reading E, Hall Z, Martens C, Haghighi T, Findlay H, Ahdash Z . Interrogating Membrane Protein Conformational Dynamics within Native Lipid Compositions. Angew Chem Int Ed Engl. 2017; 56(49):15654-15657. DOI: 10.1002/anie.201709657. View

3.
Reid D, Keener J, Wheeler A, Zambrano D, Diesing J, Reinhardt-Szyba M . Engineering Nanodisc Scaffold Proteins for Native Mass Spectrometry. Anal Chem. 2017; 89(21):11189-11192. DOI: 10.1021/acs.analchem.7b03569. View

4.
Carroll J, Altman M, Fearnley I, Walker J . Identification of membrane proteins by tandem mass spectrometry of protein ions. Proc Natl Acad Sci U S A. 2007; 104(36):14330-5. PMC: 1952138. DOI: 10.1073/pnas.0706817104. View

5.
Sanders J, Grinfeld D, Aizikov K, Makarov A, Holden D, Brodbelt J . Determination of Collision Cross-Sections of Protein Ions in an Orbitrap Mass Analyzer. Anal Chem. 2018; 90(9):5896-5902. DOI: 10.1021/acs.analchem.8b00724. View