» Articles » PMID: 31741009

PIRCHE-II: an Algorithm to Predict Indirectly Recognizable HLA Epitopes in Solid Organ Transplantation

Overview
Journal Immunogenetics
Date 2019 Nov 20
PMID 31741009
Citations 30
Authors
Affiliations
Soon will be listed here.
Abstract

Human leukocyte antigen (HLA) mismatches between donors and recipients may lead to alloreactivity after solid organ transplantation. Over the last few decades, our knowledge of the complexity of the HLA system has dramatically increased, as numerous new HLA alleles have been identified. As a result, the likelihood of alloreactive responses towards HLA mismatches after solid organ transplantation cannot easily be assessed. Algorithms are promising solutions to estimate the risk for alloreactivity after solid organ transplantation. In this review, we show that the recently developed PIRCHE-II (Predicted Indirectly ReCognizable HLA Epitopes) algorithm can be used to minimize alloreactivity towards HLA mismatches. Together with the use of other algorithms and simulation approaches, the PIRCHE-II algorithm aims for a better estimated alloreactive risk for individual patients and eventually an improved graft survival after solid organ transplantation.

Citing Articles

Editorial: Novel applications of epitope biology to improve outcomes in transplantation.

Lan J, Liwski R, Lima A, Tafulo S Front Genet. 2025; 16:1572987.

PMID: 40078477 PMC: 11897513. DOI: 10.3389/fgene.2025.1572987.


Understanding HLA-DQ in renal transplantation: a mini-review.

Das R, Greenspan N Front Immunol. 2025; 16:1525306.

PMID: 39975547 PMC: 11835797. DOI: 10.3389/fimmu.2025.1525306.


Predicted indirectly recognizable HLA epitopes scores and clinical outcomes after haploidentical stem cell transplantation in pediatric patients with relapsed neuroblastoma.

Seo E, Jeong I, Ju H, Hyun J, Lee J, Yoo K Front Immunol. 2025; 16:1517387.

PMID: 39967668 PMC: 11833256. DOI: 10.3389/fimmu.2025.1517387.


Predicted Indirectly Recognizable T-cell Epitope (PIRCHE) Load Correlates With Rejection Events After Simultaneous Pancreas-Kidney Transplantation.

Parajuli S, Niemann M, Dale B, Hidalgo L, Gupta G, Kaufman D Transplant Direct. 2025; 11(3):e1764.

PMID: 39936136 PMC: 11810031. DOI: 10.1097/TXD.0000000000001764.


Anti-Human Leukocyte Antigen Antibody Detection from Terasaki's Humoral Theory to Delisting Strategies in 2024.

San Segundo D, Comins-Boo A, Lopez-Hoyos M Int J Mol Sci. 2025; 26(2).

PMID: 39859344 PMC: 11766285. DOI: 10.3390/ijms26020630.


References
1.
Ekong U, Antala S, Bow L, Sese D, Morotti R, Rodriguez-Davalos M . HLA, Non-HLA Antibodies, and Eplet Mismatches in Pediatric Liver Transplantation: Observations From a Small, Single-Center Cohort. Exp Clin Transplant. 2019; 17(Suppl 1):6-17. PMC: 11165937. DOI: 10.6002/ect.MESOT2018.L30. View

2.
Geneugelijk K, Niemann M, de Hoop T, Spierings E . Completion of HLA protein sequences by automated homology-based nearest-neighbor extrapolation of HLA database sequences. Hum Immunol. 2016; 77(11):1030-1036. DOI: 10.1016/j.humimm.2016.04.005. View

3.
Mettu R, Charles T, Landry S . CD4+ T-cell epitope prediction using antigen processing constraints. J Immunol Methods. 2016; 432:72-81. PMC: 5321161. DOI: 10.1016/j.jim.2016.02.013. View

4.
Suciu-Foca N, Ciubotariu R, Itescu S, Rose E, Cortesini R . Indirect allorecognition of donor HLA-DR peptides in chronic rejection of heart allografts. Transplant Proc. 1998; 30(8):3999-4000. DOI: 10.1016/s0041-1345(98)01318-9. View

5.
Terasaki P, Cai J . Human leukocyte antigen antibodies and chronic rejection: from association to causation. Transplantation. 2008; 86(3):377-83. DOI: 10.1097/TP.0b013e31817c4cb8. View