Complete Genome Sequences of Xanthomonas Axonopodis Pv. Glycines Isolates from the United States and Thailand Reveal Conserved Transcription Activator-Like Effectors

Overview

Journal Genome Biol Evol

Publisher Oxford University Press

Specialties Biology
Genetics
Molecular Biology

Date 2019 Apr 28

PMID 31028379

Citations 6

Authors

Sara C D Carpenter

Lawan Kladsuwan

Sang-Wook Han

Sutruedee Prathuangwong

Adam J Bogdanove

Affiliations

Soon will be listed here.

Abstract

To compare overall genome structure and transcription activator-like effector content, we completely sequenced Xanthomonas axonopodis pv. glycines strain 12-2, isolated in 1992 in Thailand, and strain EB08, isolated in 2008 in the United States (Iowa) using PacBio technology. We reassembled the genome sequence for a second US strain, 8ra, derived from a 1980 Iowa isolate, from existing PacBio reads. Despite geographic and temporal separation, the three genomes are highly syntenous, and their transcription activator-like effector repertoires are highly conserved.

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