» Articles » PMID: 30956511

Discovery and Investigation of Mutase-like Activity in a Phenylalanine Ammonia Lyase from

Overview
Journal Top Catal
Date 2019 Apr 9
PMID 30956511
Citations 5
Authors
Affiliations
Soon will be listed here.
Abstract

The effect of extended reaction times on the regio- and enantioselectivity of the phenylalanine ammonia lyase (PAL)-catalysed amination of a subset of cinnamate derivatives was investigated. This was done using a PAL from the cyanobacterium and incubation in a concentrated ammonia buffer. Whilst early time point analyses revealed excellent selectivities to give mostly the well-documented ()-α-amino acid products, subsequent accumulation of other regio-/stereo- isomers was seen. For many -substituted substrates, the β-regioisomer, a previously-unreported product with this enzyme class, was found to become more abundant than the α-, after sufficient incubation, with slight preference for the ()-enantiomer. Although attempts to tune the selectivity of the PAL toward any of the three side products were largely unsuccessful, the results provide insight into the evolutionary history of this class of enzymes and reinforce the prominence of the toolbox of specific and selective cinnamate-aminating enzymes.

Citing Articles

Identification and Characterization of an Efficient Phenylalanine Ammonia-Lyase from Photorhabdus luminescens.

Zhang F, Ren J, Zhan J Appl Biochem Biotechnol. 2021; 193(4):1099-1115.

PMID: 33411135 DOI: 10.1007/s12010-020-03477-6.


Screening and characterization of a diverse panel of metagenomic imine reductases for biocatalytic reductive amination.

Marshall J, Yao P, Montgomery S, Finnigan J, Thorpe T, Palmer R Nat Chem. 2020; 13(2):140-148.

PMID: 33380742 PMC: 7116802. DOI: 10.1038/s41557-020-00606-w.


Overview on Multienzymatic Cascades for the Production of Non-canonical α-Amino Acids.

Martinez-Rodriguez S, Torres J, Sanchez P, Ortega E Front Bioeng Biotechnol. 2020; 8:887.

PMID: 32850740 PMC: 7431475. DOI: 10.3389/fbioe.2020.00887.


Recent Applications of Carbon-Nitrogen Lyases in Asymmetric Synthesis of Noncanonical Amino Acids and Heterocyclic Compounds.

Zhang J, Abidin M, Saravanan T, Poelarends G Chembiochem. 2020; 21(19):2733-2742.

PMID: 32315503 PMC: 7586795. DOI: 10.1002/cbic.202000214.


Purification and Characterization of Phenylalanine Ammonia-Lyase as a Novel Approach for Myristicin Biotransformation.

Arafa A, Abdel-Ghany A, El-Dahmy S, Abdelaziz S, El-Ayouty Y, El-Sayed A J Microbiol Biotechnol. 2019; 30(4):622-632.

PMID: 31581382 PMC: 9728195. DOI: 10.4014/jmb.1908.08009.

References
1.
Gloge A, Zon J, Kovari A, Poppe L, Retey J . Phenylalanine ammonia-lyase: the use of its broad substrate specificity for mechanistic investigations and biocatalysis--synthesis of L-arylalanines. Chemistry. 2000; 6(18):3386-90. DOI: 10.1002/1521-3765(20000915)6:18<3386::aid-chem3386>3.0.co;2-5. View

2.
Xiang L, Moore B . Biochemical characterization of a prokaryotic phenylalanine ammonia lyase. J Bacteriol. 2005; 187(12):4286-9. PMC: 1151709. DOI: 10.1128/JB.187.12.4286-4289.2005. View

3.
Yamada S, Nabe K, Izuo N, Nakamichi K, Chibata I . Production of l-Phenylalanine from trans-Cinnamic Acid with Rhodotorula glutinis Containing l-Phenylalanine Ammonia-Lyase Activity. Appl Environ Microbiol. 1981; 42(5):773-8. PMC: 244106. DOI: 10.1128/aem.42.5.773-778.1981. View

4.
Pilbak S, Tomin A, Retey J, Poppe L . The essential tyrosine-containing loop conformation and the role of the C-terminal multi-helix region in eukaryotic phenylalanine ammonia-lyases. FEBS J. 2006; 273(5):1004-19. DOI: 10.1111/j.1742-4658.2006.05127.x. View

5.
Moffitt M, Louie G, Bowman M, Pence J, Noel J, Moore B . Discovery of two cyanobacterial phenylalanine ammonia lyases: kinetic and structural characterization. Biochemistry. 2007; 46(4):1004-12. PMC: 2586389. DOI: 10.1021/bi061774g. View