» Articles » PMID: 30748049

Structural Characterization of the Third Scavenger Receptor Cysteine-rich Domain of Murine Neurotrypsin

Overview
Journal Protein Sci
Specialty Biochemistry
Date 2019 Feb 13
PMID 30748049
Citations 5
Authors
Affiliations
Soon will be listed here.
Abstract

Neurotrypsin (NT) is a multi-domain serine protease of the nervous system with only one known substrate: the large proteoglycan Agrin. NT has seen to be involved in the maintenance/turnover of neuromuscular junctions and in processes of synaptic plasticity in the central nervous system. Roles which have been tied to its enzymatic activity, localized in the C-terminal serine-protease (SP) domain. However the purpose of NT's remaining 3-4 scavenger receptor cysteine-rich (SRCR) domains is still unclear. We have determined the crystal structure of the third SRCR domain of murine NT (mmNT-SRCR3), immediately preceding the SP domain and performed a comparative structural analysis using homologous SRCR structures. Our data and the elevated degree of structural conservation with homologous domains highlight possible functional roles for NT SRCRs. Computational and experimental analyses suggest the identification of a putative binding region for Ca ions, known to regulate NT enzymatic activity. Furthermore, sequence and structure comparisons allow to single out regions of interest that, in future studies, might be implicated in Agrin recognition/binding or in interactions with as of yet undiscovered NT partners.

Citing Articles

Genome-Wide Comparative Analysis of SRCR Gene Superfamily in Invertebrates Reveals Massive and Independent Gene Expansions in the Sponge and Sea Urchin.

Peng Z, Zhang W, Fu H, Li Y, Zhang C, Li J Int J Mol Sci. 2024; 25(3).

PMID: 38338794 PMC: 10855680. DOI: 10.3390/ijms25031515.


Refolding, Crystallization, and Crystal Structure Analysis of a Scavenger Receptor Cysteine-Rich Domain of Human Salivary Agglutinin Expressed in Escherichia coli.

Zhang C, Lu P, Wei S, Hu C, Miyoshi M, Okamoto K Protein J. 2024; 43(2):283-297.

PMID: 38265733 PMC: 11058800. DOI: 10.1007/s10930-023-10173-x.


Deconstruction of Neurotrypsin Reveals a Multi-factorially Regulated Activity Affecting Myotube Formation and Neuronal Excitability.

Canciani A, Capitanio C, Stanga S, Faravelli S, Scietti L, Mapelli L Mol Neurobiol. 2022; 59(12):7466-7485.

PMID: 36197591 PMC: 9616769. DOI: 10.1007/s12035-022-03056-2.


Structures of SALSA/DMBT1 SRCR domains reveal the conserved ligand-binding mechanism of the ancient SRCR fold.

Reichhardt M, Loimaranta V, Lea S, Johnson S Life Sci Alliance. 2020; 3(4).

PMID: 32098784 PMC: 7043408. DOI: 10.26508/lsa.201900502.


Dissecting the Extracellular Complexity of Neuromuscular Junction Organizers.

Guarino S, Canciani A, Forneris F Front Mol Biosci. 2020; 6:156.

PMID: 31998752 PMC: 6966886. DOI: 10.3389/fmolb.2019.00156.

References
1.
Madsen M, Moller H, Nielsen M, Jacobsen C, Graversen J, van den Berg T . Molecular characterization of the haptoglobin.hemoglobin receptor CD163. Ligand binding properties of the scavenger receptor cysteine-rich domain region. J Biol Chem. 2004; 279(49):51561-7. DOI: 10.1074/jbc.M409629200. View

2.
Molinari F, Rio M, Meskenaite V, Encha-Razavi F, Auge J, Bacq D . Truncating neurotrypsin mutation in autosomal recessive nonsyndromic mental retardation. Science. 2002; 298(5599):1779-81. DOI: 10.1126/science.1076521. View

3.
Bikker F, Ligtenberg A, Nazmi K, Veerman E, Vant Hof W, Bolscher J . Identification of the bacteria-binding peptide domain on salivary agglutinin (gp-340/DMBT1), a member of the scavenger receptor cysteine-rich superfamily. J Biol Chem. 2002; 277(35):32109-15. DOI: 10.1074/jbc.M203788200. View

4.
Chen V, Arendall 3rd W, Headd J, Keedy D, Immormino R, Kapral G . MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr D Biol Crystallogr. 2010; 66(Pt 1):12-21. PMC: 2803126. DOI: 10.1107/S0907444909042073. View

5.
Kajiwara K, Sugaya E . Cloning and characterization of seizure-related gene, SEZ-6. Biochem Biophys Res Commun. 1995; 216(1):382-9. DOI: 10.1006/bbrc.1995.2635. View