» Articles » PMID: 30555439

Expression and Characterization of a New PolyG-Specific Alginate Lyase From Marine Bacterium Sp. Q7

Overview
Journal Front Microbiol
Specialty Microbiology
Date 2018 Dec 18
PMID 30555439
Citations 14
Authors
Affiliations
Soon will be listed here.
Abstract

Alginate lyases play an important role in preparation of alginate oligosaccharides. Although a large number of alginate lyases have been characterized, reports on directional preparation of alginate oligosaccharides by alginate lyases are still rather less. Here, a gene encoding a new alginate lyase AlyM was cloned from sp. Q7 and expressed in . AlyM exhibited the maximumactivity at pH 7.0 and 55°C and showed special preference to poly-guluronic acid (polyG). Glycine promoted the extracellular secretion of AlyM by 3.6 times. PBS and glycerol significantly improved the thermal stability of AlyM, the enzyme activity remained 75 and 78% after heat-treatment at 45°C for 2 h, respectively. ESI-MS analysis suggested that AlyM mainly produced oligosaccharides with degrees of polymerization (DP) of 2-5. The results of H-NMR showed that guluronic acid (G) occupied the reducing end of the end products, indicating that AlyM preferred to degrade the glycosidic bond at the G-X linkage. HPLC analysis showed that the hydrolysis products with a lower degree of polymerization contained more G. Therefore, AlyM shows good potential to produce alginate oligosaccharides with specific M/G ratio and molecular weights.

Citing Articles

Polymer degrading marine bacteria: an un(der)utilized source of chemical and biocatalytic novelty.

Zhong W, Agarwal V Beilstein J Org Chem. 2024; 20:1635-1651.

PMID: 39076296 PMC: 11285056. DOI: 10.3762/bjoc.20.146.


Enzyme-Linked Lipid Nanocarriers for Coping Pseudomonal Pulmonary Infection. Would Nanocarriers Complement Biofilm Disruption or Pave Its Road?.

Nafee N, Gaber D, Abouelfetouh A, Alseqely M, Empting M, Schneider M Int J Nanomedicine. 2024; 19:3861-3890.

PMID: 38708178 PMC: 11068056. DOI: 10.2147/IJN.S445955.


Response of serovar Typhimurium to alginate oligosaccharides fermented with fecal inoculum: integrated transcriptomic and metabolomic analyses.

Cheng J, Xiao M, Ren X, Secundo F, Yu Y, Nan S Mar Life Sci Technol. 2023; 5(2):242-256.

PMID: 37275545 PMC: 10232696. DOI: 10.1007/s42995-023-00176-z.


Efficient Degradation of Alginate and Preparation of Alginate Oligosaccharides by a Novel Biofunctional Alginate Lyase with High Activity and Excellent Thermophilic Features.

Li L, Cao S, Zhu B, Yao Z, Zhu B, Qin Y Mar Drugs. 2023; 21(3).

PMID: 36976229 PMC: 10056287. DOI: 10.3390/md21030180.


Alginate Lyases from Marine Bacteria: An Enzyme Ocean for Sustainable Future.

Barzkar N, Sheng R, Sohail M, Jahromi S, Babich O, Sukhikh S Molecules. 2022; 27(11).

PMID: 35684316 PMC: 9181867. DOI: 10.3390/molecules27113375.


References
1.
Miyake O, Hashimoto W, Murata K . An exotype alginate lyase in Sphingomonas sp. A1: overexpression in Escherichia coli, purification, and characterization of alginate lyase IV (A1-IV). Protein Expr Purif. 2003; 29(1):33-41. DOI: 10.1016/s1046-5928(03)00018-4. View

2.
Sanchez-Machado D, Lopez-Cervantes J, Lopez-Hernandez J, Paseiro-Losada P, Simal-Lozano J . Determination of the uronic acid composition of seaweed dietary fibre by HPLC. Biomed Chromatogr. 2004; 18(2):90-7. DOI: 10.1002/bmc.297. View

3.
Holtan S, Zhang Q, Strand W, Skjak-Braek G . Characterization of the hydrolysis mechanism of polyalternating alginate in weak acid and assignment of the resulting MG-oligosaccharides by NMR spectroscopy and ESI-mass spectrometry. Biomacromolecules. 2006; 7(7):2108-21. DOI: 10.1021/bm050984q. View

4.
Formaneck M, Ma L, Cui Q . Effects of temperature and salt concentration on the structural stability of human lymphotactin: insights from molecular simulations. J Am Chem Soc. 2006; 128(29):9506-17. PMC: 2600855. DOI: 10.1021/ja061620o. View

5.
Leone S, Molinaro A, Alfieri F, Cafaro V, Lanzetta R, Di Donato A . The biofilm matrix of Pseudomonas sp. OX1 grown on phenol is mainly constituted by alginate oligosaccharides. Carbohydr Res. 2006; 341(14):2456-61. DOI: 10.1016/j.carres.2006.06.011. View