Architecture and Subunit Arrangement of the Complete Saccharomyces Cerevisiae COMPASS Complex
Authors
Affiliations
Methylation of histone H3 lysine 4 (H3K4) is catalyzed by the multi-component COMPASS or COMPASS-like complex, which is highly conserved from yeast to human, and plays essential roles in gene expression and transcription, cell cycle progression, and DNA repair. Here we present a cryo-EM map of the complete S. cerevisiae COMPASS complex. Through tag or Fab labeling strategy combined with cryo-EM 3D reconstruction and cross-linking and mass spectrometry (XL-MS) analysis, we uncovered new information on the subunit arrangement: Cps50, Cps35, and Cps30 were determined to group together to form the face region in the head of the complex, and Cps40 and the N-terminal portion of Set1 reside on the top of the head. Our map reveals the location of the active center and a canyon in the back of the head. Together, our study provides the first snapshot of the complete architecture of yeast COMPASS and a picture of its subunit interaction network, which could facilitate our understanding of the COMPASS machinery and its functionality.
Cho U Subcell Biochem. 2024; 104:101-117.
PMID: 38963485 DOI: 10.1007/978-3-031-58843-3_6.
Zhao Q, Hong X, Wang Y, Zhang S, Ding Z, Meng X Commun Biol. 2024; 7(1):715.
PMID: 38858498 PMC: 11164986. DOI: 10.1038/s42003-024-06406-z.
: a powerful model organism to explore histone modifications and their upstream regulations.
Yu Y, Wang S, Wang Z, Gao R, Lee J Epigenetics. 2023; 18(1):2211362.
PMID: 37196184 PMC: 10193919. DOI: 10.1080/15592294.2023.2211362.
Diverse and dynamic forms of gene regulation by the S. cerevisiae histone methyltransferase Set1.
Deshpande N, Bryk M Curr Genet. 2023; 69(2-3):91-114.
PMID: 37000206 DOI: 10.1007/s00294-023-01265-3.
Deshpande N, Jordan R, Henderson Pozzi M, Bryk M Curr Genet. 2022; 68(2):181-194.
PMID: 35041077 PMC: 8976815. DOI: 10.1007/s00294-022-01226-2.