Structural Studies Reveal the Molecular Mechanism of PETase
Overview
Affiliations
Poly(ethylene terephthalate) (PET) is a class of plastic material widely used in modern society, but large amounts of PET waste cause severe environmental problems. Obtained from a PET-consuming bacterium Ideonella sakaiensis, the enzyme PETase exhibits superb hydrolytic activity and substrate preference toward PET. Here, we summarize some recent advances in the crystallographic analysis of PETase. These reports uncover structural features of PETase that are involved in its catalytic activity. In comparison to homologous enzymes, PETase contains an additional disulfide bond as well as an extended β8-α6 loop. More importantly, the crystal structures of PETase in complex with substrate and product analogs provide critical information for understanding the mechanism of action of PETase. In particular, the wobbling conformation of W156 is closely related to the binding of substrate and product. These new findings are of great importance for further in-depth research and engineering development of PETase, and should advance the implementation of plastic biodegradation strategy.
Wang X, Song C, Qi Q, Zhang Y, Li R, Huo L Eng Microbiol. 2024; 2(2):100020.
PMID: 39628843 PMC: 11611003. DOI: 10.1016/j.engmic.2022.100020.
From Bulk to Binding: Decoding the Entry of PET into Hydrolase Binding Pockets.
Jackering A, Gottsch F, Schaffler M, Doerr M, Bornscheuer U, Wei R JACS Au. 2024; 4(10):4000-4012.
PMID: 39483243 PMC: 11522925. DOI: 10.1021/jacsau.4c00718.
Omic-driven strategies to unveil microbiome potential for biodegradation of plastics: a review.
Shafana Farveen M, Narayanan R Arch Microbiol. 2024; 206(11):441.
PMID: 39432094 DOI: 10.1007/s00203-024-04165-3.
Jackering A, van der Kamp M, Strodel B, Zinovjev K J Chem Inf Model. 2024; 64(19):7544-7554.
PMID: 39344272 PMC: 11480989. DOI: 10.1021/acs.jcim.4c00776.
Measuring PETase enzyme kinetics by single-molecule microscopy.
Zhang Y, Hancock W Biophys J. 2024; 123(21):3669-3677.
PMID: 39300753 PMC: 11560301. DOI: 10.1016/j.bpj.2024.09.016.