» Articles » PMID: 29533993

Nanoparticle-Assisted Metabolomics

Overview
Journal Metabolites
Publisher MDPI
Date 2018 Mar 14
PMID 29533993
Citations 6
Authors
Affiliations
Soon will be listed here.
Abstract

Understanding and harnessing the interactions between nanoparticles and biological molecules is at the forefront of applications of nanotechnology to modern biology. Metabolomics has emerged as a prominent player in systems biology as a complement to genomics, transcriptomics and proteomics. Its focus is the systematic study of metabolite identities and concentration changes in living systems. Despite significant progress over the recent past, important challenges in metabolomics remain, such as the deconvolution of the spectra of complex mixtures with strong overlaps, the sensitive detection of metabolites at low abundance, unambiguous identification of known metabolites, structure determination of unknown metabolites and standardized sample preparation for quantitative comparisons. Recent research has demonstrated that some of these challenges can be substantially alleviated with the help of nanoscience. Nanoparticles in particular have found applications in various areas of bioanalytical chemistry and metabolomics. Their chemical surface properties and increased surface-to-volume ratio endows them with a broad range of binding affinities to biomacromolecules and metabolites. The specific interactions of nanoparticles with metabolites or biomacromolecules help, for example, simplify metabolomics spectra, improve the ionization efficiency for mass spectrometry or reveal relationships between spectral signals that belong to the same molecule. Lessons learned from nanoparticle-assisted metabolomics may also benefit other emerging areas, such as nanotoxicity and nanopharmaceutics.

Citing Articles

Automated Diagnosis and Phenotyping of Tuberculosis Using Serum Metabolic Fingerprints.

Liu Y, Wang R, Zhang C, Huang L, Chen J, Zeng Y Adv Sci (Weinh). 2024; 11(39):e2406233.

PMID: 39159075 PMC: 11497029. DOI: 10.1002/advs.202406233.


Advances in experimental and computational methodologies for the study of microbial-surface interactions at different omics levels.

Gonzalez-Plaza J, Furlan C, Rijavec T, Lapanje A, Barros R, Tamayo-Ramos J Front Microbiol. 2022; 13:1006946.

PMID: 36519168 PMC: 9744117. DOI: 10.3389/fmicb.2022.1006946.


Nanopsychiatry: Is it a big thing in small size?.

Prakash J, Chaudhury S, Chatterjee K, Srivastava K Ind Psychiatry J. 2022; 31(2):181-182.

PMID: 36419682 PMC: 9678163. DOI: 10.4103/ipj.ipj_157_22.


Differentiation of meat species of raw and processed meat based on polar metabolites using H NMR spectroscopy combined with multivariate data analysis.

Decker C, Krapf R, Kuballa T, Bunzel M Front Nutr. 2022; 9:985797.

PMID: 36245505 PMC: 9566576. DOI: 10.3389/fnut.2022.985797.


Quantitative NMR-Based Biomedical Metabolomics: Current Status and Applications.

Crook A, Powers R Molecules. 2020; 25(21).

PMID: 33158172 PMC: 7662776. DOI: 10.3390/molecules25215128.


References
1.
Zhang B, Xie M, Bruschweiler-Li L, Bruschweiler R . Nanoparticle-Assisted Removal of Protein in Human Serum for Metabolomics Studies. Anal Chem. 2015; 88(1):1003-7. PMC: 5358798. DOI: 10.1021/acs.analchem.5b03889. View

2.
Perrone B, Springhetti S, Ramadori F, Rastrelli F, Mancin F . "NMR chemosensing" using monolayer-protected nanoparticles as receptors. J Am Chem Soc. 2013; 135(32):11768-71. DOI: 10.1021/ja406688a. View

3.
Scida K, Stege P, Haby G, Messina G, Garcia C . Recent applications of carbon-based nanomaterials in analytical chemistry: critical review. Anal Chim Acta. 2011; 691(1-2):6-17. PMC: 3088727. DOI: 10.1016/j.aca.2011.02.025. View

4.
Ge C, Tian J, Zhao Y, Chen C, Zhou R, Chai Z . Towards understanding of nanoparticle-protein corona. Arch Toxicol. 2015; 89(4):519-39. DOI: 10.1007/s00204-015-1458-0. View

5.
Zhang B, Xie M, Bruschweiler-Li L, Bingol K, Bruschweiler R . Use of Charged Nanoparticles in NMR-Based Metabolomics for Spectral Simplification and Improved Metabolite Identification. Anal Chem. 2015; 87(14):7211-7. PMC: 5358793. DOI: 10.1021/acs.analchem.5b01142. View