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Genome Size Diversity and Its Impact on the Evolution of Land Plants

Overview
Journal Genes (Basel)
Publisher MDPI
Date 2018 Feb 15
PMID 29443885
Citations 111
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Abstract

Genome size is a biodiversity trait that shows staggering diversity across eukaryotes, varying over 64,000-fold. Of all major taxonomic groups, land plants stand out due to their staggering genome size diversity, ranging ca. 2400-fold. As our understanding of the implications and significance of this remarkable genome size diversity in land plants grows, it is becoming increasingly evident that this trait plays not only an important role in shaping the evolution of plant genomes, but also in influencing plant community assemblages at the ecosystem level. Recent advances and improvements in novel sequencing technologies, as well as analytical tools, make it possible to gain critical insights into the genomic and epigenetic mechanisms underpinning genome size changes. In this review we provide an overview of our current understanding of genome size diversity across the different land plant groups, its implications on the biology of the genome and what future directions need to be addressed to fill key knowledge gaps.

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References
1.
Petrov D . Mutational equilibrium model of genome size evolution. Theor Popul Biol. 2002; 61(4):531-44. DOI: 10.1006/tpbi.2002.1605. View

2.
Dodsworth S, Jang T, Struebig M, Chase M, Weiss-Schneeweiss H, Leitch A . Genome-wide repeat dynamics reflect phylogenetic distance in closely related allotetraploid (Solanaceae). Plant Syst Evol. 2020; 303(8):1013-1020. PMC: 6961477. DOI: 10.1007/s00606-016-1356-9. View

3.
Kovach A, Wegrzyn J, Parra G, Holt C, Bruening G, Loopstra C . The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences. BMC Genomics. 2010; 11:420. PMC: 2996948. DOI: 10.1186/1471-2164-11-420. View

4.
Kelly L, Renny-Byfield S, Pellicer J, Macas J, Novak P, Neumann P . Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytol. 2015; 208(2):596-607. PMC: 4744688. DOI: 10.1111/nph.13471. View

5.
Oliver M, Petrov D, Ackerly D, Falkowski P, Schofield O . The mode and tempo of genome size evolution in eukaryotes. Genome Res. 2007; 17(5):594-601. PMC: 1855170. DOI: 10.1101/gr.6096207. View